multi_mst v2 on fast_hdbscan update #21
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| name: Tests | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }} | |
| cancel-in-progress: true | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - 'doc/**' | |
| - 'notebooks/**' | |
| - 'README.md' | |
| - '.gitignore' | |
| - '.github/workflows/Docs.yml' | |
| - '.github/workflows/Publish.yml' | |
| pull_request: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - 'doc/**' | |
| - 'notebooks/**' | |
| - 'README.md' | |
| - '.gitignore' | |
| - '.github/workflows/Docs.yml' | |
| - '.github/workflows/Publish.yml' | |
| workflow_dispatch: | |
| jobs: | |
| build_dists: | |
| name: Build dists | |
| runs-on: ubuntu-20.04 | |
| outputs: | |
| WHEEL_NAME: ${{ steps.dists.outputs.WHEEL_NAME }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| name: Install python | |
| with: | |
| python-version: 3.9 | |
| cache: 'pip' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install twine flake8 build | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| - name: Build dists | |
| id: dists | |
| run: | | |
| python -m build --sdist --wheel | |
| python ci/export_name.py | |
| - name: Check README rendering for PyPI | |
| run: twine check dist/* | |
| - name: Upload sdist result | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: dists | |
| path: dist/* | |
| if-no-files-found: error | |
| test_sdist: | |
| name: Test dist for cp${{ matrix.python }}-${{ matrix.platform_id }}-${{ matrix.manylinux_image }} | |
| needs: build_dists | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| include: | |
| - os: windows-latest | |
| python: "3.9" | |
| platform_id: win_amd64 | |
| - os: windows-latest | |
| python: "3.10" | |
| platform_id: win_amd64 | |
| - os: windows-latest | |
| python: "3.11" | |
| platform_id: win_amd64 | |
| # Linux 64 bit manylinux2014 | |
| - os: ubuntu-latest | |
| python: "3.9" | |
| platform_id: manylinux_x86_64 | |
| manylinux_image: manylinux2014 | |
| - os: ubuntu-latest | |
| python: "3.10" | |
| platform_id: manylinux_x86_64 | |
| manylinux_image: manylinux2014 | |
| - os: ubuntu-latest | |
| python: "3.11" | |
| platform_id: manylinux_x86_64 | |
| manylinux_image: manylinux2014 | |
| # MacOS x86_64 | |
| - os: macos-latest | |
| python: "3.9" | |
| platform_id: macosx_x86_64 | |
| - os: macos-latest | |
| python: "3.10" | |
| platform_id: macosx_x86_64 | |
| - os: macos-latest | |
| python: "3.11" | |
| platform_id: macosx_x86_64 | |
| steps: | |
| - name: Download sdist | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: dists | |
| path: dist/ | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install pytest | |
| - name: Run tests | |
| run: | | |
| pip install dist/${{ needs.build_dists.outputs.WHEEL_NAME }} | |
| python -c "from multi_mst.tests import run_tests; run_tests()" | |