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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,56 @@ | ||
| name: Documentation | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }} | ||
| cancel-in-progress: true | ||
|
|
||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| paths: | ||
| - 'doc/**' | ||
| - 'multi_mst/*.py' | ||
| - '.github/workflows/Docs.yml' | ||
| workflow_dispatch: | ||
|
|
||
| jobs: | ||
| pages: | ||
| runs-on: ubuntu-20.04 | ||
| environment: | ||
| name: github-pages | ||
| url: ${{ steps.deployment.outputs.page_url }} | ||
| permissions: | ||
| pages: write | ||
| id-token: write | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| with: | ||
| fetch-depth: 0 | ||
|
|
||
| - uses: actions/setup-python@v5 | ||
| name: Install python | ||
| with: | ||
| python-version: 3.9 | ||
| cache: 'pip' | ||
|
|
||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| sudo apt-get install -y pandoc | ||
| pip install -e . | ||
| - name: Prepare Examples | ||
| run: | | ||
| cd notebooks | ||
| for FILE in *.ipynb; do | ||
| cp $FILE ../doc | ||
| done | ||
| cd .. | ||
| - id: deployment | ||
| uses: sphinx-notes/pages@v3 | ||
| with: | ||
| cache: True | ||
| checkout: False | ||
| documentation_path: ./doc | ||
| requirements_path: ./doc/requirements.txt |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,57 @@ | ||
| name: Publish Python Package | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }} | ||
| cancel-in-progress: false | ||
|
|
||
| on: | ||
| push: | ||
| tags: | ||
| - v* | ||
| workflow_dispatch: | ||
|
|
||
| jobs: | ||
| publish_pypi: | ||
| name: Publish to PyPi | ||
| runs-on: ubuntu-20.04 | ||
| permissions: | ||
| # IMPORTANT: this permission is mandatory for trusted publishing | ||
| id-token: write | ||
| contents: write | ||
| environment: | ||
| name: pypi | ||
| url: https://pypi.org/p/multi_mst | ||
| steps: | ||
| - name: Extract version | ||
| id: version | ||
| run: | | ||
| TAG=${{ github.ref }} | ||
| VERSION=${TAG#refs/tags/v} | ||
| echo "version=$VERSION" >> $GITHUB_OUTPUT | ||
| echo "tag=v$VERSION" >> $GITHUB_OUTPUT | ||
| - name: Download sdist | ||
| uses: dawidd6/action-download-artifact@v7 | ||
| with: | ||
| github_token: ${{ secrets.GITHUB_TOKEN }} | ||
| workflow: Tests.yml | ||
| workflow_conclusion: success | ||
| branch: main | ||
| path: . | ||
|
|
||
| - name: Move files to dist | ||
| run: | | ||
| mkdir dist | ||
| mv dists/* dist/ | ||
| if [[ ! -f dist/multi_mst-${{ steps.version.outputs.version }}.tar.gz ]] ; then exit 1; fi | ||
| - name: Create Github Release | ||
| env: | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| run: | | ||
| gh release create -R vda-lab/multi_mst -t "Version ${{ steps.version.outputs.version }}" -n "**Full Changelog**: https://github.com/vda-lab/multi_mst/commits/${{ steps.version.outputs.tag }}" "${{ steps.version.outputs.tag }}" dist/*.whl dist/*.tar.gz | ||
| - name: Publish package to (Test)PyPI | ||
| uses: pypa/[email protected] | ||
| # Comment lines below to publish to PyPi instead of test PyPi | ||
| # with: | ||
| # repository-url: https://test.pypi.org/legacy/ |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,136 @@ | ||
| name: Tests | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }} | ||
| cancel-in-progress: true | ||
|
|
||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| paths-ignore: | ||
| - 'doc/**' | ||
| - 'notebooks/**' | ||
| - 'README.md' | ||
| - '.gitignore' | ||
| - '.github/workflows/Docs.yml' | ||
| - '.github/workflows/Publish.yml' | ||
| pull_request: | ||
| branches: | ||
| - main | ||
| paths-ignore: | ||
| - 'doc/**' | ||
| - 'notebooks/**' | ||
| - 'README.md' | ||
| - '.gitignore' | ||
| - '.github/workflows/Docs.yml' | ||
| - '.github/workflows/Publish.yml' | ||
| workflow_dispatch: | ||
|
|
||
| jobs: | ||
| build_dists: | ||
| name: Build dists | ||
| runs-on: ubuntu-20.04 | ||
| outputs: | ||
| WHEEL_NAME: ${{ steps.dists.outputs.WHEEL_NAME }} | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| with: | ||
| fetch-depth: 0 | ||
|
|
||
| - uses: actions/setup-python@v5 | ||
| name: Install python | ||
| with: | ||
| python-version: 3.9 | ||
| cache: 'pip' | ||
|
|
||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| pip install -r requirements.txt | ||
| pip install twine flake8 build | ||
| - name: Lint with flake8 | ||
| run: | | ||
| # stop the build if there are Python syntax errors or undefined names | ||
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | ||
| - name: Build dists | ||
| id: dists | ||
| run: | | ||
| python -m build --sdist --wheel | ||
| python ci/export_name.py | ||
| - name: Check README rendering for PyPI | ||
| run: twine check dist/* | ||
|
|
||
| - name: Upload sdist result | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: dists | ||
| path: dist/* | ||
| if-no-files-found: error | ||
|
|
||
| test_sdist: | ||
| name: Test dist for cp${{ matrix.python }}-${{ matrix.platform_id }}-${{ matrix.manylinux_image }} | ||
| needs: build_dists | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| fail-fast: true | ||
| matrix: | ||
| include: | ||
| - os: windows-latest | ||
| python: "3.9" | ||
| platform_id: win_amd64 | ||
| - os: windows-latest | ||
| python: "3.10" | ||
| platform_id: win_amd64 | ||
| - os: windows-latest | ||
| python: "3.11" | ||
| platform_id: win_amd64 | ||
|
|
||
| # Linux 64 bit manylinux2014 | ||
| - os: ubuntu-latest | ||
| python: "3.9" | ||
| platform_id: manylinux_x86_64 | ||
| manylinux_image: manylinux2014 | ||
| - os: ubuntu-latest | ||
| python: "3.10" | ||
| platform_id: manylinux_x86_64 | ||
| manylinux_image: manylinux2014 | ||
| - os: ubuntu-latest | ||
| python: "3.11" | ||
| platform_id: manylinux_x86_64 | ||
| manylinux_image: manylinux2014 | ||
|
|
||
| # MacOS x86_64 | ||
| - os: macos-latest | ||
| python: "3.9" | ||
| platform_id: macosx_x86_64 | ||
| - os: macos-latest | ||
| python: "3.10" | ||
| platform_id: macosx_x86_64 | ||
| - os: macos-latest | ||
| python: "3.11" | ||
| platform_id: macosx_x86_64 | ||
| steps: | ||
| - name: Download sdist | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: dists | ||
| path: dist/ | ||
|
|
||
| - name: Setup Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: ${{ matrix.python }} | ||
|
|
||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| pip install pytest | ||
| - name: Run tests | ||
| run: | | ||
| pip install dist/${{ needs.build_dists.outputs.WHEEL_NAME }} | ||
| python -c "from multi_mst.tests import run_tests; run_tests()" | ||
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