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Obsoleted 3,8-divinyl protochlorophyllide a 8-vinyl reductase activit… #29750

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Feb 19, 2025
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Obsoleted 3,8-divinyl protochlorophyllide a 8-vinyl reductase activit… #29750

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24 changes: 14 additions & 10 deletions src/ontology/go-edit.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -196339,16 +196339,21 @@ property_value: term_tracker_item "https://github.com/geneontology/go-ontology/i

[Term]
id: GO:0033728
name: divinyl chlorophyllide a 8-vinyl-reductase activity
name: 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity
namespace: molecular_function
def: "Catalysis of the reaction: chlorophyllide a + NADP+ = divinyl chlorophyllide a + NADPH + H+." [EC:1.3.1.75]
def: "Catalysis of the reaction: protochlorophyllide a + NADP+ = 3,8-divinyl protochlorophyllide a + NADPH + H+, and chlorophyllide a + NADP+ = 3,8-divinyl chlorophyllide a + NADPH + H+." [EC:1.3.1.75]
synonym: "3,8-divinyl protochlorophyllide a 8-vinyl reductase activity" EXACT []
synonym: "3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activit" EXACT []
synonym: "4VCR" RELATED [EC:1.3.1.75]
synonym: "[4-vinyl]chlorophyllide a reductase activity" RELATED [EC:1.3.1.75]
synonym: "chlorophyllide-a:NADP+ oxidoreductase activity" RELATED [EC:1.3.1.75]
xref: EC:1.3.1.75
xref: MetaCyc:RXN-5286
xref: RHEA:14449
xref: MetaCyc:RXN-5286 {source="skos:narrowMatch"}
xref: MetaCyc:RXN1F-72 {source="skos:narrowMatch"}
xref: RHEA:14449 {source="skos:narrowMatch"}
xref: RHEA:48884 {source="skos:narrowMatch"}
is_a: GO:0016628 ! oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/29701" xsd:anyURI

[Term]
id: GO:0033729
Expand Down Expand Up @@ -328791,14 +328796,13 @@ is_a: GO:0016636 ! oxidoreductase activity, acting on the CH-CH group of donors,

[Term]
id: GO:0051744
name: 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity
name: obsolete 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity
namespace: molecular_function
def: "Catalysis of the reaction: protochlorophyllide a + NADP+ = 3,8-divinyl protochlorophyllide a + NADPH + H+." [RHEA:48884]
synonym: "3,8-divinyl protochlorophyllide a 8-vinyl reductase activity" BROAD []
xref: MetaCyc:RXN1F-72
xref: RHEA:48884 {source="skos:exactMatch"}
is_a: GO:0016628 ! oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
def: "OBSOLETE. Catalysis of the reaction: protochlorophyllide a + NADP+ = 3,8-divinyl protochlorophyllide a + NADPH + H+." [GOC:rynl]
comment: The reason for obsoletion is that this term is equivalent to divinyl chlorophyllide a 8-vinyl-reductase activity.\n.
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/29701" xsd:anyURI
is_obsolete: true
replaced_by: GO:0033728

[Term]
id: GO:0051745
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33 changes: 1 addition & 32 deletions src/ontology/imports/go-catalytic-activities-participants.owl
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Expand Up @@ -148827,38 +148827,7 @@

<!-- http://purl.obolibrary.org/obo/GO_0051744 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0051744">
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_15378"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_57783"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_58349"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_58632"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_83350"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GO_0051744"/>



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