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add trivvy and fix vulnerability #342

add trivvy and fix vulnerability

add trivvy and fix vulnerability #342

Workflow file for this run

name: test-with-wis2box
on: [ push, pull_request ]
jobs:
main:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
name: setup Python
with:
python-version: 3.8
- name: Install dependencies
working-directory: docker_compose_test
run: |
python3 -m pip install --upgrade pip
pip3 install -r requirements.txt
- name: Docker Compose up -d --build
working-directory: docker_compose_test
run:
docker compose up -d --build
- name: Wait for service to be ready
run: sleep 30
- name: publish datasets
working-directory: docker_compose_test
run: |
docker exec -t wis2box-api-test-wis2box-management wis2box dataset publish /data/wis2box/metadata/discovery/synop-test.yml
docker exec -t wis2box-api-test-wis2box-management wis2box dataset publish /data/wis2box/metadata/discovery/csv-test.yml
docker exec -t wis2box-api-test-wis2box-management wis2box dataset publish /data/wis2box/metadata/discovery/bufr-test.yml
docker exec -t wis2box-api-test-wis2box-management wis2box dataset publish /data/wis2box/metadata/discovery/cap-test.yml
- name: publish stations and associate to topic
working-directory: docker_compose_test
run: |
docker exec -t wis2box-api-test-wis2box-management wis2box metadata station publish-collection -p /data/wis2box/metadata/station/station_list.csv -th origin/a/wis2/synop-test/data/core/weather/surface-based-observations/synop
docker exec -t wis2box-api-test-wis2box-management wis2box metadata station add-topic --wsi 0-20000-0-15015 origin/a/wis2/csv-test/data/core/weather/surface-based-observations/synop
docker exec -t wis2box-api-test-wis2box-management wis2box metadata station add-topic --wsi 0-20000-0-16344 origin/a/wis2/bufr-test/data/core/weather/surface-based-observations/synop
curl http://localhost:4343/oapi/collections/stations/items
- name: Check status code API
working-directory: docker_compose_test
run: |
status_code=$(curl -s -o /dev/null -w "%{http_code}" http://localhost:4343/oapi)
if [[ $status_code -ne 200 ]]; then
echo "Request failed with status code $status_code"
exit 1
fi
- name: run integration tests ⚙️
working-directory: docker_compose_test
run: |
pytest -s tests/integration
- name: failed tests 🚩
working-directory: docker_compose_test
if: ${{ failure() }}
run: |
docker compose logs