updated Delly version from v0.9.1 to v1.0.3 in the Dockerfile (#4)

* updated Delly version from v0.9.1 to v1.0.3 in the Dockerfile

* Update README.md

* Update CHANGELOG.md

* Update metadata.yaml

* Update CHANGELOG.md

added unreleased tag for 1.0.3

* Update CHANGELOG.md

Co-authored-by: Mootor <mmootor@ip-0A125218.rhxrlfvjyzbupc03cc22jkch3c.xx.internal.cloudapp.net>

CHANGELOG.md

@@ -7,6 +7,12 @@ This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.htm
 
 ---
 
+## [Unreleased]
+### Changed
+- Upgrade Delly version from 0.9.1 to 1.0.3
+
+---
+
 ## [0.9.1] - 2021-12-06
 ### Added
 - Add docker PR template
@@ -20,4 +26,4 @@ This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.htm
 
 ## [0.8.7] - 2021-04-29
 ### Added
-- Migrate Delly dockerfile to its own repository
+- Migrate Delly dockerfile to its own repository

Dockerfile

@@ -1,7 +1,7 @@
 FROM blcdsdockerregistry/bl-base:1.1.0 AS builder
 
 # Use conda to install tools and dependencies into /usr/local
-ARG DELLY_VERSION=0.9.1
+ARG DELLY_VERSION=1.0.3
 RUN conda create -qy -p /usr/local \
     -c bioconda \
     -c conda-forge \
@@ -11,4 +11,4 @@ RUN conda create -qy -p /usr/local \
 FROM ubuntu:20.04
 COPY --from=builder /usr/local /usr/local
 
-LABEL maintainer="Yu Pan <yupan@mednet.ucla.edu>"
+LABEL maintainer="Mohammed Faizal Eeman Mootor <mmootor@mednet.ucla.edu>"

README.md

@@ -10,7 +10,7 @@ Delly GitHub repository [here](https://github.com/dellytools/delly)
 # Version
 | Tool | Version |
 |------|---------|
-|Delly| 0.9.1|
+|Delly| 1.0.3|
 
 
 ---
@@ -26,7 +26,7 @@ https://doi.org/10.1093/bioinformatics/bts378
 
 ## License
 
-Author: 'Timothy Sanders', 'Yu Pan'
+Author: 'Timothy Sanders', 'Yu Pan', 'Mohammed Faizal Eeman Mootor'
 
 docker-delly is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.
 
@@ -36,4 +36,4 @@ Copyright (C) 2021 University of California Los Angeles ("Boutros Lab") All righ
 
 This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
 
-This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
+This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

metadata.yaml

@@ -1,10 +1,10 @@
 ---
 Category: 'docker'
 Description: 'Docker repository for Delly'
-Maintainers: ['[email protected]']
-Contributors: ['Timothy Sanders', 'Yu Pan']
+Maintainers: ['[email protected]', '[email protected]']
+Contributors: ['Timothy Sanders', 'Yu Pan', 'Mohammed Faizal Eeman Mootor']
 Languages: ['Dockerfile']
 Tools: ['Delly']
-Version: ['0.9.1']
+Version: ['1.0.3']
 Purpose of tool: 'Delly is an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data.'
 References: 'https://github.com/dellytools/delly'