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Data_model_description
Willy Wong edited this page Apr 10, 2018
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Data field | Type | Description |
---|---|---|
CIL_CCDB.CIL.Data_types.Still_image | boolean | It is set to true if it is a 2D image. Otherwise, it's set to false |
CIL_CCDB.CIL.Data_types.Time_series | boolean | It is set to true if it is a 2D image or Z stack image with the time axis. Otherwise, it's set to false |
CIL_CCDB.CIL.Data_types.Video | boolean | It is set to true if it is a video or animation dataset. Otherwise, it's set to false |
CIL_CCDB.CIL.Data_types.Z_stack | boolean | It is set to true if it is a Z stack image meaning that it contains 2D images along the z axis. Otherwise, it's set to false |
CIL_CCDB.CIL.Data_types.Still_image | boolean | It is set to true if it is a 2D image. Otherwise, it's set to false |
CIL_CCDB.CIL.Status.Archived_data | long | It is an optional field. It contains the archival timestamp without time zone. |
CIL_CCDB.CIL.Status.Deleted | boolean | It is set to true if this dataset is logically deleted |
CIL_CCDB.CIL.Status.Is_public | boolean | It is set to true if this dataset is a public dataset |
CIL_CCDB.CIL.Status.Last_modified | long | It is an optional field. It contains the most recent modification timestamp without time zone |
CIL_CCDB.CIL.Status.Owner | String | It is an optional field. It is used internally for identifying who the data owner is |
CIL_CCDB.CIL.Status.Rsync_date | long | It is an optional field. It is used internally for keeping tracking the Rysnc timestamp |
CIL_CCDB.CIL.Citation.Title | String | It contains the citation information for the people who want to cite the CIL |
CIL_CCDB.CIL.Citation.ARK | String | Archival Resource Key |
CIL_CCDB.CIL.Citation.DOI | String | Digital Object Identifier |
CIL_CCDB.CIL.Image_files.File_path | String | It contains the CIL conventional file path such as $ID.tif, $ID.jpg, or $ID.zip |
CIL_CCDB.CIL.Image_files.File_type | String | It contains the CIL conventional file type such as OME_tif, Jpeg, or Zip |
CIL_CCDB.CIL.Image_files.Mime_type | String | It contains the mime type for the file such as image/tif, image/jpeg, and application/zip |
CIL_CCDB.CIL.Image_files.Size | long | It contains the data size in number of bytes |
CIL_CCDB.CIL.Alternative_image_files.File_path | String | It is an optional field. Alternative_image_files.File_path overwrites Image_files.File_path when the file path does not meet the CIL file convention |
CIL_CCDB.CIL.Alternative_image_files.File_type | String | It is an optional field. Alternative_image_files.File_type overwrites Image_files.File_type when the file path does not meet the CIL file convention |
CIL_CCDB.CIL.Alternative_image_files.Mime_type | String | It is an optional field. Alternative_image_files.Mime_type overwrites Image_files.Mime_type when the file path does not meet the CIL file convention |
CIL_CCDB.CIL.Alternative_image_files.Size | long | It is an optional field. Alternative_image_files.Size overwrites Image_files.Size when the file path does not meet the CIL file convention |
CIL_CCDB.CIL.Alternative_image_files.URL_postfix | String | It is an optional field. URL_postfix is used to compose the downloadable with the prefix, https://cildata.crbs.ucsd.edu |
CIL_CCDB.CIL.CORE.ATTRIBUTION.Contributors | String | It is an optional field. The author of the dataset |
CIL_CCDB.CIL.CORE.ATTRIBUTION.DATE | String | It is an optional field. "MM/YYYY" is the format |
CIL_CCDB.CIL.CORE.ATTRIBUTION.OTHER | String | It is an optional field. It contains the additional information about the attribution |
CIL_CCDB.CIL.CORE.ATTRIBUTION.PUBLISHED | String | It is an optional field. It contains the publication information. |
CIL_CCDB.CIL.CORE.ATTRIBUTION.PUBMED | String | It is an optional field. It contains the PUBMED ID. |
CIL_CCDB.CIL.CORE.ATTRIBUTION.URLs | String | It is an optional field. It contains the external hyperlink. |
CIL_CCDB.CIL.CORE.BIOLOGICALPROCESS.onto_id | String | It is an optional field. It contains the ontology ID in the biological process domain. |
CIL_CCDB.CIL.CORE.BIOLOGICALPROCESS.onto_name | String | It is an optional field. It contains the scientific name in the biological process domain. |
CIL_CCDB.CIL.CORE.BIOLOGICALPROCESS.free_text | String | It is an optional field. If no ontology ID is used, this field provides the free text about the biological process in this dataset. |
CIL_CCDB.CIL.CORE.CELLLINE.onto_id | String | It is an optional field. It contains the ontology ID in the cell line domain. |
CIL_CCDB.CIL.CORE.CELLLINE.onto_name | String | It is an optional field. It contains the scientific name in the cell line domain. |
CIL_CCDB.CIL.CORE.CELLLINE.free_text | String | It is an optional field. If no ontology ID is used, this field provides the free text about the cell line in this dataset. |