chore(deps): update pre-commit hooks

[pre-commit-ci]

updates:

• github.com/astral-sh/ruff-pre-commit: v0.11.0 → v0.11.4
• github.com/henryiii/validate-pyproject-schema-store: 2025.03.10 → 2025.04.07
• github.com/python-jsonschema/check-jsonschema: 0.31.3 → 0.32.1

[henryiii]

Fedora's failing due to:

>       out = build_wheel(str(dist))

/var/ARTIFACTS/work-pytestou3qcj9s/tests/plans/pytest/discover/default-0/tests/tests/test_setuptools_abi3.py:41: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
/usr/lib/python3.13/site-packages/setuptools/build_meta.py:421: in build_wheel
    return self._build_with_temp_dir(
/usr/lib/python3.13/site-packages/setuptools/build_meta.py:403: in _build_with_temp_dir
    self.run_setup()
/usr/lib/python3.13/site-packages/setuptools/build_meta.py:318: in run_setup
    exec(code, locals())
<string>:3: in <module>
    ???
/usr/lib/python3.13/site-packages/setuptools/__init__.py:117: in setup
    return distutils.core.setup(**attrs)
/usr/lib/python3.13/site-packages/setuptools/_distutils/core.py:171: in setup
    ok = dist.parse_command_line()
/usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:472: in parse_command_line
    args = self._parse_command_opts(parser, args)
/usr/lib/python3.13/site-packages/setuptools/dist.py:852: in _parse_command_opts
    nargs = _Distribution._parse_command_opts(self, parser, args)
/usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:531: in _parse_command_opts
    cmd_class = self.get_command_class(command)
/usr/lib/python3.13/site-packages/setuptools/dist.py:691: in get_command_class
    from .command.bdist_wheel import bdist_wheel
/usr/lib/python3.13/site-packages/setuptools/command/bdist_wheel.py:25: in <module>
    from wheel.metadata import pkginfo_to_metadata

I think this means there's a mismatch in versions for wheel and setuptools.

[LecrisUT]

Oh, but those tests are running with PyPI dependencies. I will move the installation part to a more visible location.

22:11:18             out:   Created wheel for scikit_build_core: filename=scikit_build_core-0.11.0-py3-none-any.whl size=179861 sha256=7d0d1a21ad0c44295c7dadc5d4fa4da85fa4d5314296e91e4cff057c86895f71
22:11:18             out:   Stored in directory: /tmp/pip-ephem-wheel-cache-ewz2_5x5/wheels/e3/6f/de/fc349bec4d27addee8711dbbc1b7adbea36d657c91a4c6f9a9
22:11:18             out: Successfully built scikit_build_core
22:11:18             out: Installing collected packages: distlib, pyproject_hooks, pybind11, pluggy, platformdirs, pathspec, packaging, iniconfig, filelock, execnet, cattrs, wheel, virtualenv, scikit_build_core, pytest, build, pytest-xdist, pytest-subprocess
22:11:19             out: Successfully installed build-1.2.2.post1 cattrs-24.1.3 distlib-0.3.9 execnet-2.1.1 filelock-3.18.0 iniconfig-2.1.0 packaging-24.2 pathspec-0.12.1 platformdirs-4.3.7 pluggy-1.5.0 pybind11-2.13.6 pyproject_hooks-1.2.0 pytest-8.3.5 pytest-subprocess-1.5.3 pytest-xdist-3.6.1 scikit_build_core-0.11.0 virtualenv-20.30.0 wheel-0.46.1
22:11:19             err: WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager, possibly rendering your system unusable.It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv. Use the --root-user-action option if you know what you are doing and want to suppress this warning.

Seems like I've added a similar workaround in #800. Maybe I missed something in the dependencies since I am only installing [test] there so far.

[henryiii]

I'm hiding the warning for now but setuptools/wheel might need to work this out. Might be a 0.46.1 issue if it's wheel, that just came out.