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test: working on benchmarks with Finch
as backend
#772
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@@ -15,16 +15,19 @@ def format_id(format): | |||||||||||||||||||||||
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@pytest.mark.parametrize("format", ["coo", "gcxs"]) | ||||||||||||||||||||||||
def test_matmul(benchmark, sides, format, seed, max_size, ids=format_id): | ||||||||||||||||||||||||
def test_matmul(benchmark, sides, seed, format, backend, min_size, max_size, ids=format_id): | ||||||||||||||||||||||||
m, n, p = sides | ||||||||||||||||||||||||
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if m * n >= max_size or n * p >= max_size: | ||||||||||||||||||||||||
if m * n >= max_size or n * p >= max_size or m * n <= min_size or n * p <= min_size: | ||||||||||||||||||||||||
pytest.skip() | ||||||||||||||||||||||||
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rng = np.random.default_rng(seed=seed) | ||||||||||||||||||||||||
x = sparse.random((m, n), density=DENSITY, format=format, random_state=rng) | ||||||||||||||||||||||||
y = sparse.random((n, p), density=DENSITY, format=format, random_state=rng) | ||||||||||||||||||||||||
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There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. All the tests on file There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. @mtsokol How hard would it be to add this to There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. You can probably use There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Do we just need a format=nothing default and then a reformatting line inside finch.random? There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. That'd suffice -- if the format isn't what the There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. do we have a way of specifying format currently? There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more.
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
operator.matmul = sparse.compiled(operator.matmul) | ||||||||||||||||||||||||
Comment on lines
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Suggested change
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Suggested change
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x @ y # Numba compilation | ||||||||||||||||||||||||
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Suggested change
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@benchmark | ||||||||||||||||||||||||
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@@ -50,8 +53,12 @@ def elemwise_args(request, seed, max_size): | |||||||||||||||||||||||
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@pytest.mark.parametrize("f", [operator.add, operator.mul]) | ||||||||||||||||||||||||
def test_elemwise(benchmark, f, elemwise_args): | ||||||||||||||||||||||||
def test_elemwise(benchmark, f, elemwise_args, backend): | ||||||||||||||||||||||||
x, y = elemwise_args | ||||||||||||||||||||||||
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
f = sparse.compiled(f) | ||||||||||||||||||||||||
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f(x, y) | ||||||||||||||||||||||||
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@benchmark | ||||||||||||||||||||||||
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@@ -78,6 +85,10 @@ def elemwise_broadcast_args(request, seed, max_size): | |||||||||||||||||||||||
@pytest.mark.parametrize("f", [operator.add, operator.mul]) | ||||||||||||||||||||||||
def test_elemwise_broadcast(benchmark, f, elemwise_broadcast_args): | ||||||||||||||||||||||||
x, y = elemwise_broadcast_args | ||||||||||||||||||||||||
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
f = sparse.compiled(f) | ||||||||||||||||||||||||
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f(x, y) | ||||||||||||||||||||||||
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@benchmark | ||||||||||||||||||||||||
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@@ -101,6 +112,9 @@ def test_index_scalar(benchmark, indexing_args): | |||||||||||||||||||||||
side = x.shape[0] | ||||||||||||||||||||||||
rank = x.ndim | ||||||||||||||||||||||||
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
operator.getitem = sparse.compiled(operator.getitem) | ||||||||||||||||||||||||
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x[(side // 2,) * rank] # Numba compilation | ||||||||||||||||||||||||
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@benchmark | ||||||||||||||||||||||||
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@@ -113,6 +127,9 @@ def test_index_slice(benchmark, indexing_args): | |||||||||||||||||||||||
side = x.shape[0] | ||||||||||||||||||||||||
rank = x.ndim | ||||||||||||||||||||||||
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
operator.getitem = sparse.compiled(operator.getitem) | ||||||||||||||||||||||||
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x[(slice(side // 2),) * rank] # Numba compilation | ||||||||||||||||||||||||
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@benchmark | ||||||||||||||||||||||||
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@@ -126,6 +143,9 @@ def test_index_fancy(benchmark, indexing_args, seed): | |||||||||||||||||||||||
rng = np.random.default_rng(seed=seed) | ||||||||||||||||||||||||
index = rng.integers(0, side, size=(side // 2,)) | ||||||||||||||||||||||||
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
operator.getitem = sparse.compiled(operator.getitem) | ||||||||||||||||||||||||
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x[index] # Numba compilation | ||||||||||||||||||||||||
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@benchmark | ||||||||||||||||||||||||
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@@ -165,6 +185,9 @@ def densemul_args(request, sides, seed, max_size): | |||||||||||||||||||||||
def test_gcxs_dot_ndarray(benchmark, densemul_args): | ||||||||||||||||||||||||
x, t = densemul_args | ||||||||||||||||||||||||
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if hasattr(sparse, "compiled"): | ||||||||||||||||||||||||
operator.matmul = sparse.compiled(operator.matmul) | ||||||||||||||||||||||||
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# Numba compilation | ||||||||||||||||||||||||
x @ t | ||||||||||||||||||||||||
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