Update modules doc

docs/src/modules.md

@@ -1,36 +1,39 @@
-`gget` currently consists of the following modules:
-- [`gget ref`](ref.md)  
-Fetch File Transfer Protocols (FTPs) and metadata for reference genomes and annotations from [Ensembl](https://www.ensembl.org/) by species.
-
-- [`gget search`](search.md)   
-Fetch genes and transcripts from [Ensembl](https://www.ensembl.org/) using free-form search terms.
-
-- [`gget info`](info.md)  
-Fetch extensive gene and transcript metadata from [Ensembl](https://www.ensembl.org/), [UniProt](https://www.uniprot.org/), and [NCBI](https://www.ncbi.nlm.nih.gov/) using Ensembl IDs.  
+`gget` currently consists of the following modules:  
+- [`gget alphafold`](alphafold.md)  
+Predict the 3D structure of a protein from its amino acid sequence using a simplified version of [DeepMind](https://www.deepmind.com/)’s [AlphaFold2](https://github.com/deepmind/alphafold).  
 
-- [`gget seq`](seq.md)  
-Fetch nucleotide or amino acid sequences of genes or transcripts from [Ensembl](https://www.ensembl.org/) or [UniProt](https://www.uniprot.org/), respectively.  
+- [`gget archs4`](archs4.md)  
+Find the most correlated genes to a gene of interest or find the gene's tissue expression atlas using [ARCHS4](https://maayanlab.cloud/archs4/).  
 
 - [`gget blast`](blast.md)  
-BLAST a nucleotide or amino acid sequence to any [BLAST](https://blast.ncbi.nlm.nih.gov/Blast.cgi) database.
+BLAST a nucleotide or amino acid sequence to any [BLAST](https://blast.ncbi.nlm.nih.gov/Blast.cgi) database.  
 
 - [`gget blat`](blat.md)  
-Find the genomic location of a nucleotide or amino acid sequence using [BLAT](https://genome.ucsc.edu/cgi-bin/hgBlat).
-
-- [`gget muscle`](muscle.md)  
-Align multiple nucleotide or amino acid sequences to each other using [Muscle5](https://www.drive5.com/muscle/).
+Find the genomic location of a nucleotide or amino acid sequence using [BLAT](https://genome.ucsc.edu/cgi-bin/hgBlat).  
 
 - [`gget enrichr`](enrichr.md)  
-Perform an enrichment analysis on a list of genes using [Enrichr](https://maayanlab.cloud/Enrichr/).
+Perform an enrichment analysis on a list of genes using [Enrichr](https://maayanlab.cloud/Enrichr/).  
 
-- [`gget archs4`](archs4.md)  
-Find the most correlated genes to a gene of interest or find the gene's tissue expression atlas using [ARCHS4](https://maayanlab.cloud/archs4/).
+- [`gget gpt`](gpt.md)  
+Generates text based on a given prompt using the [OpenAI API](https://openai.com/)'s 'openai.ChatCompletion.create' endpoint.  
+
+- [`gget info`](info.md)  
+Fetch extensive gene and transcript metadata from [Ensembl](https://www.ensembl.org/), [UniProt](https://www.uniprot.org/), and [NCBI](https://www.ncbi.nlm.nih.gov/) using Ensembl IDs.  
+
+- [`gget muscle`](muscle.md)  
+Align multiple nucleotide or amino acid sequences to each other using [Muscle5](https://www.drive5.com/muscle/).  
 
 - [`gget pdb`](pdb.md)  
-Get the structure and metadata of a protein from the [RCSB Protein Data Bank](https://www.rcsb.org/). 
+Get the structure and metadata of a protein from the [RCSB Protein Data Bank](https://www.rcsb.org/).  
 
-- [`gget alphafold`](alphafold.md)  
-Predict the 3D structure of a protein from its amino acid sequence using a simplified version of [DeepMind](https://www.deepmind.com/)’s [AlphaFold2](https://github.com/deepmind/alphafold).   
-
-- [`gget gpt`](gpt.md)  
-Generates text based on a given prompt using the [OpenAI API](https://openai.com/).   
+- [`gget ref`](ref.md)  
+Fetch File Transfer Protocols (FTPs) and metadata for reference genomes and annotations from [Ensembl](https://www.ensembl.org/) by species.  
+
+- [`gget search`](search.md)   
+Fetch genes and transcripts from [Ensembl](https://www.ensembl.org/) using free-form search terms.  
+
+- [`gget setup`](setup.md)  
+Helper module to install/download third-party dependencies for a specified gget module.  
+
+- [`gget seq`](seq.md)  
+Fetch nucleotide or amino acid sequences of genes or transcripts from [Ensembl](https://www.ensembl.org/) or [UniProt](https://www.uniprot.org/), respectively.