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lauraluebbert authored May 25, 2022
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[![license](https://img.shields.io/pypi/l/gget)](LICENSE)
[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.6534041.svg)](https://doi.org/10.5281/zenodo.6534041)
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`gget` is a free and open-source command-line tool and Python package that enables efficient querying of genomic databases. `gget` consists of a collection of separate but interoperable modules, each designed to facilitate one type of database querying in a single line of code.

*If you use `gget` in a publication, please [cite*](#cite):*
If you use `gget` in a publication, please [cite*](#cite):
Luebbert, L. & Pachter, L. (2022). Efficient querying of genomic databases for single-cell RNA-seq with gget. bioRxiv 2022.05.17.492392; doi: https://doi.org/10.1101/2022.05.17.492392

![alt text](https://github.com/pachterlab/gget/blob/main/figures/gget_overview.png?raw=true)
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