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Okinawa Institute of Science & Technology

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  1. Usiigaci Usiigaci Public

    Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning

    Jupyter Notebook 195 68

  2. LaTeX-templates LaTeX-templates Public

    Graduate School LaTeX templates for Lab rotation proposal + report, OIST beamer and Thesis + thesis proposal

    63 57

  3. optinist optinist Public

    calcium imaging pipeline tool

    TypeScript 39 13

  4. DenseObjectDetection DenseObjectDetection Public

    Detection of objects in an image using segmentation

    Python 34 14

  5. DenseObjectAnnotation DenseObjectAnnotation Public

    Tool to annotate objects in images.

    JavaScript 19 8

  6. course-scheduler course-scheduler Public

    Python code to generate course schedules for the Graduate School

    Python 13 6

Repositories

Showing 10 of 171 repositories
  • NEXTNet Public

    C++ implementation of the NEXT-Net algorithm for efficient simulation of epidemics on complex networks

    C++ 0 LGPL-3.0 0 0 0 Updated Apr 1, 2025
  • optinist Public

    calcium imaging pipeline tool

    TypeScript 39 GPL-3.0 13 50 9 Updated Apr 1, 2025
  • NEXTNetR Public
    C++ 0 GPL-3.0 0 0 0 Updated Apr 1, 2025
  • emevo Public

    Simluate Embodied Evolution of Agents

    Jupyter Notebook 2 Apache-2.0 0 0 0 Updated Mar 31, 2025
  • iSciComp Public

    JupyterBook: Introduction to Scientific Computation

    Jupyter Notebook 0 CC0-1.0 0 0 0 Updated Mar 28, 2025
  • LuscombeU_CodingTheTreeofLife Public
    Python 0 1 0 0 Updated Mar 28, 2025
  • Physics-of-Behavior-Tutorials Public
    Jupyter Notebook 0 1 0 0 Updated Mar 28, 2025
  • nf-core_configs Public Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    Nextflow 0 MIT 299 0 1 Updated Mar 27, 2025
  • BioinfoUgrp_UnixGoodies_Images Public

    Singularity images with cool Unix tools to be exported as modules in HPC clusters

    Dockerfile 3 0 3 0 Updated Mar 24, 2025
  • smartphone-robot-android Public

    Android development for smartphone-robot

    Java 0 1 3 0 Updated Mar 24, 2025
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