Fix Dropout #17
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Fix Dropout #17
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changed max step size back to 1
…into sensitivity
Fixed figure layout and added docstrings.
This reverts commit 3c8acda.
Matplotlib
Refactored to move sorting to base function 'Visualize'.
Refactored clustering to move feature selection outside of function.
Made obsolete by Visualize.py that contains all visualization functions.
Made obsolete by Visualization.py, FeatureAnalysis.py and PathwayAnalysis.py
Refactored to remove functions for analysis. Updated layout to improve longer axes labels.
Performs gene set enrichment analysis of risk gradients and generates visualizations.
Performs risk gradient analysis of models and generates visualizations.
Used for reading in Gene Matrix Transposed files for pathway analysis.
Performs single-sample gene set enrichment analysis.
Updated for refactoring analysis code and addition of new functions/files.
Refactor analysis
Fixed single typo in import.
Added Docker Installation guide.
Modified Documentation
Add Apache 2.0 license.
Updated everything except Docker instructions.
Version0 - Ubuntu Docker image with Anaconda installation Version1 - Ubuntu Docker image with pip installation
Updating Docker text.
Clarified mounting process.
simplified user guide
Added explicit references to readme.
Analysis fix2
Update README.md
added requirements
Fix references and links.
Analysis fixes
fixed analysis init and function call in ModelAnalysis
Dtype error fix
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