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@ArrogantGao
ArrogantGao committed Jan 23, 2024
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230 changes: 222 additions & 8 deletions Manifest.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

julia_version = "1.10.0"
manifest_format = "2.0"
project_hash = "9cd209c424a1099d1b8897c3638e32453526ca36"
project_hash = "a4e81b0858916cf819a3ffbe4462c5db64b6d0ef"

[[deps.AbstractFFTs]]
deps = ["LinearAlgebra"]
Expand Down Expand Up @@ -60,6 +60,12 @@ uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
[[deps.Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[deps.BenchmarkTools]]
deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"]
git-tree-sha1 = "f1f03a9fa24271160ed7e73051fba3c1a759b53f"
uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
version = "1.4.0"

[[deps.BitTwiddlingConvenienceFunctions]]
deps = ["Static"]
git-tree-sha1 = "0c5f81f47bbbcf4aea7b2959135713459170798b"
Expand All @@ -72,12 +78,30 @@ git-tree-sha1 = "601f7e7b3d36f18790e2caf83a882d88e9b71ff1"
uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9"
version = "0.2.4"

[[deps.Calculus]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad"
uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9"
version = "0.5.1"

[[deps.CellListMap]]
deps = ["DocStringExtensions", "LinearAlgebra", "Parameters", "PrecompileTools", "ProgressMeter", "Random", "Setfield", "StaticArrays", "TestItems"]
git-tree-sha1 = "5e8ab8eb4d360bf944409cb25fd5d61015fbfdfa"
uuid = "69e1c6dd-3888-40e6-b3c8-31ac5f578864"
version = "0.8.23"

[[deps.CloseOpenIntervals]]
deps = ["Static", "StaticArrayInterface"]
git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1"
uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9"
version = "0.1.12"

[[deps.CommonSubexpressions]]
deps = ["MacroTools", "Test"]
git-tree-sha1 = "7b8a93dba8af7e3b42fecabf646260105ac373f7"
uuid = "bbf7d656-a473-5ed7-a52c-81e309532950"
version = "0.3.0"

[[deps.Compat]]
deps = ["UUIDs"]
git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d"
Expand Down Expand Up @@ -119,10 +143,59 @@ git-tree-sha1 = "f7f4319567fe769debfcf7f8c03d8da1dd4e2fb0"
uuid = "717857b8-e6f2-59f4-9121-6e50c889abd2"
version = "0.7.9"

[[deps.DataAPI]]
git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c"
uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
version = "1.15.0"

[[deps.DataStructures]]
deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "ac67408d9ddf207de5cfa9a97e114352430f01ed"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.18.16"

[[deps.Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[deps.DelimitedFiles]]
deps = ["Mmap"]
git-tree-sha1 = "9e2f36d3c96a820c678f2f1f1782582fcf685bae"
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"
version = "1.9.1"

[[deps.DiffResults]]
deps = ["StaticArraysCore"]
git-tree-sha1 = "782dd5f4561f5d267313f23853baaaa4c52ea621"
uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5"
version = "1.1.0"

[[deps.DiffRules]]
deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"]
git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272"
uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
version = "1.15.1"

[[deps.Distributed]]
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[deps.Distributions]]
deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"]
git-tree-sha1 = "7c302d7a5fec5214eb8a5a4c466dcf7a51fcf169"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.107"

[deps.Distributions.extensions]
DistributionsChainRulesCoreExt = "ChainRulesCore"
DistributionsDensityInterfaceExt = "DensityInterface"
DistributionsTestExt = "Test"

[deps.Distributions.weakdeps]
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
DensityInterface = "b429d917-457f-4dbc-8f4c-0cc954292b1d"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[deps.DocStringExtensions]]
deps = ["LibGit2"]
git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d"
Expand All @@ -134,6 +207,24 @@ deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
version = "1.6.0"

[[deps.DualNumbers]]
deps = ["Calculus", "NaNMath", "SpecialFunctions"]
git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566"
uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74"
version = "0.6.8"

[[deps.EwaldSummations]]
deps = ["ExTinyMD", "ForwardDiff", "SpecialFunctions"]
git-tree-sha1 = "d45cb38013907050abef2ec28f04bbd3b0221c06"
uuid = "329efeb5-5dc7-45f3-8303-d0bcfeef1c8a"
version = "0.1.0"

[[deps.ExTinyMD]]
deps = ["BenchmarkTools", "CellListMap", "DelimitedFiles", "Distributions", "LinearAlgebra", "Random", "StaticArrays"]
git-tree-sha1 = "a06582adc578353293b6ef4e41e281b6d5f8eb27"
uuid = "fec76197-d59f-46dd-a0ed-76a83c21f7aa"
version = "0.2.3"

[[deps.FFTW]]
deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"]
git-tree-sha1 = "ec22cbbcd01cba8f41eecd7d44aac1f23ee985e3"
Expand Down Expand Up @@ -172,16 +263,22 @@ deps = ["LinearAlgebra", "Random"]
git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "1.9.3"
weakdeps = ["PDMats", "SparseArrays", "Statistics"]

[deps.FillArrays.extensions]
FillArraysPDMatsExt = "PDMats"
FillArraysSparseArraysExt = "SparseArrays"
FillArraysStatisticsExt = "Statistics"

[deps.FillArrays.weakdeps]
PDMats = "90014a1f-27ba-587c-ab20-58faa44d9150"
SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
[[deps.ForwardDiff]]
deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"]
git-tree-sha1 = "cf0fe81336da9fb90944683b8c41984b08793dad"
uuid = "f6369f11-7733-5829-9624-2563aa707210"
version = "0.10.36"
weakdeps = ["StaticArrays"]

[deps.ForwardDiff.extensions]
ForwardDiffStaticArraysExt = "StaticArrays"

[[deps.Future]]
deps = ["Random"]
Expand All @@ -204,6 +301,12 @@ git-tree-sha1 = "eb8fed28f4994600e29beef49744639d985a04b2"
uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0"
version = "0.1.16"

[[deps.HypergeometricFunctions]]
deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685"
uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a"
version = "0.3.23"

[[deps.IfElse]]
git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1"
uuid = "615f187c-cbe4-4ef1-ba3b-2fcf58d6d173"
Expand Down Expand Up @@ -235,6 +338,12 @@ git-tree-sha1 = "7e5d6779a1e09a36db2a7b6cff50942a0a7d0fca"
uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
version = "1.5.0"

[[deps.JSON]]
deps = ["Dates", "Mmap", "Parsers", "Unicode"]
git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.21.4"

[[deps.LLVMOpenMP_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "d986ce2d884d49126836ea94ed5bfb0f12679713"
Expand Down Expand Up @@ -347,10 +456,25 @@ deps = ["Artifacts", "Libdl"]
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
version = "2.28.2+1"

[[deps.Missings]]
deps = ["DataAPI"]
git-tree-sha1 = "f66bdc5de519e8f8ae43bdc598782d35a25b1272"
uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
version = "1.1.0"

[[deps.Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[deps.MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
version = "2023.1.10"

[[deps.NaNMath]]
deps = ["OpenLibm_jll"]
git-tree-sha1 = "0877504529a3e5c3343c6f8b4c0381e57e4387e4"
uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
version = "1.0.2"

[[deps.NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
version = "1.2.0"
Expand Down Expand Up @@ -380,6 +504,29 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1"
uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e"
version = "0.5.5+0"

[[deps.OrderedCollections]]
git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.6.3"

[[deps.PDMats]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.11.31"

[[deps.Parameters]]
deps = ["OrderedCollections", "UnPack"]
git-tree-sha1 = "34c0e9ad262e5f7fc75b10a9952ca7692cfc5fbe"
uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a"
version = "0.12.3"

[[deps.Parsers]]
deps = ["Dates", "PrecompileTools", "UUIDs"]
git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "2.8.1"

[[deps.Pkg]]
deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
Expand Down Expand Up @@ -425,6 +572,22 @@ version = "1.4.1"
deps = ["Unicode"]
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[[deps.Profile]]
deps = ["Printf"]
uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79"

[[deps.ProgressMeter]]
deps = ["Distributed", "Printf"]
git-tree-sha1 = "00099623ffee15972c16111bcf84c58a0051257c"
uuid = "92933f4c-e287-5a05-a399-4b506db050ca"
version = "1.9.0"

[[deps.QuadGK]]
deps = ["DataStructures", "LinearAlgebra"]
git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e"
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
version = "2.9.4"

[[deps.REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
Expand All @@ -450,6 +613,18 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7"
uuid = "ae029012-a4dd-5104-9daa-d747884805df"
version = "1.3.0"

[[deps.Rmath]]
deps = ["Random", "Rmath_jll"]
git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b"
uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
version = "0.7.1"

[[deps.Rmath_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "6ed52fdd3382cf21947b15e8870ac0ddbff736da"
uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f"
version = "0.4.0+0"

[[deps.SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
version = "0.7.0"
Expand Down Expand Up @@ -477,6 +652,12 @@ version = "1.1.1"
[[deps.Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[deps.SortingAlgorithms]]
deps = ["DataStructures"]
git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085"
uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c"
version = "1.2.1"

[[deps.SparseArrays]]
deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
Expand Down Expand Up @@ -535,6 +716,32 @@ deps = ["LinearAlgebra", "SparseArrays"]
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
version = "1.10.0"

[[deps.StatsAPI]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "1ff449ad350c9c4cbc756624d6f8a8c3ef56d3ed"
uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
version = "1.7.0"

[[deps.StatsBase]]
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf"
uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.34.2"

[[deps.StatsFuns]]
deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]
git-tree-sha1 = "f625d686d5a88bcd2b15cd81f18f98186fdc0c9a"
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "1.3.0"

[deps.StatsFuns.extensions]
StatsFunsChainRulesCoreExt = "ChainRulesCore"
StatsFunsInverseFunctionsExt = "InverseFunctions"

[deps.StatsFuns.weakdeps]
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112"

[[deps.SuiteSparse]]
deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"]
uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"
Expand All @@ -554,6 +761,15 @@ deps = ["ArgTools", "SHA"]
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
version = "1.10.0"

[[deps.Test]]
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[deps.TestItems]]
git-tree-sha1 = "8621ba2637b49748e2dc43ba3d84340be2938022"
uuid = "1c621080-faea-4a02-84b6-bbd5e436b8fe"
version = "0.1.1"

[[deps.ThreadingUtilities]]
deps = ["ManualMemory"]
git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27"
Expand All @@ -565,13 +781,11 @@ deps = ["AbstractFFTs", "DSP", "FillArrays", "LinearAlgebra"]
git-tree-sha1 = "a097662c0fd28143bb714e4527ac2dcb7520212e"
uuid = "c751599d-da0a-543b-9d20-d0a503d91d24"
version = "0.8.2"
weakdeps = ["StatsBase"]

[deps.ToeplitzMatrices.extensions]
ToeplitzMatricesStatsBaseExt = "StatsBase"

[deps.ToeplitzMatrices.weakdeps]
StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"

[[deps.UUIDs]]
deps = ["Random", "SHA"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
Expand Down
2 changes: 2 additions & 0 deletions Project.toml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -4,10 +4,12 @@ authors = ["xzgao <[email protected]> and contributors"]
version = "1.0.0-DEV"

[deps]
EwaldSummations = "329efeb5-5dc7-45f3-8303-d0bcfeef1c8a"
FFTW = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
FastTransforms = "057dd010-8810-581a-b7be-e3fc3b93f78c"
LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
LoopVectorization = "bdcacae8-1622-11e9-2a5c-532679323890"
Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"

[compat]
Expand Down
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