Releases: EBI-Metagenomics/ena-api-handler
Releases · EBI-Metagenomics/ena-api-handler
Bugfix release
What's Changed
- Bump requests from 2.28.1 to 2.31.0 by @dependabot in #27
- Refactor some get_assembly and get_study_runs to retry with different portals by @mberacochea in #32
- Develop by @mberacochea in #33
New Contributors
- @dependabot made their first contribution in #27
Full Changelog: v2.0.3...v2.0.4
Bugfix release
What's Changed
- Hotfix - empty json return by @SandyRogers, @Vkale1 and @KeteSakharova in #29
- Added the "status" field for Runs by default by @mberacochea in #30
Full Changelog: v2.0.2...v2.0.3
Allow assembly downloads from ena portal when metagenome fails
- get_study_assemblies will attempt to fetch from ena portal if the metagenome portal returns an empty result
- change json decoding to json from requests
Better error handling and samples metadata fields migration
What's Changed
- Improve ENA error handling, surface the API errors for easier debugging. by @mberacochea in #26
Full Changelog: v2.0.0...v2.0.1
The "sample" fields that changed:
- host_scientific_name -> host
- environmental_package -> ncbi_reporting_standard
Environmental package was deprecated by the GSC.
ENA Portal API v2.0 migration
What's Changed
- Upgrade dep - requests, drop 3.6 in GHA by @mberacochea in #24
- Switch to api v2 by @KeteSakharova in #25
Full Changelog: v1.2.1...v2.0.0
Extra field for RUNS - status_id
Merge pull request #23 from EBI-Metagenomics/develop Merge - run_reads status_id field
1.2.0
Merge pull request #22 from EBI-Metagenomics/develop Bump version -> v1.2.0
Version v1.1.0
No major changes. Code clean up and dependencies updates for the most part.