Sagemath: ModuleNotFoundError

[Eloitor]

Is this a new report?

Yes

System Info

Void 6.6.37_1 x86_64 GenuineIntel uptodate rrmFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF

Package(s) Affected

sagemath-10.5_2

Does a report exist for this bug with the project's home (upstream) and/or another distro?

No response

Expected behaviour

Sagemath can run *.sage files

Actual behaviour

Sagemath crashes.

eloi@void ~/test> cat example.sage
print(42)
eloi@void ~/test> sage example.sage
Traceback (most recent call last):
  File "/home/eloi/test/example.sage.py", line 4, in <module>
    from sage.all_cmdline import *   # import sage library
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named 'sage'

Steps to reproduce

1. create a *.sage file and enter some sage code.
2. run it with sage.

[dkwo]

It's working fine for me. Any custom stuff?

[classabbyamp]

which sage? env | grep VIRTUAL?

[Eloitor]

$ which sage
/usr/bin/sage

env | grep VIRTUAL returns nothing

[Eloitor]

I can reproduce this bug in 2 different computers with void.

[dkwo]

What if you try as a new user? does xbps-pkgdb -a report anything? if you xbps-install -f sagemath, do you see any warnings?

[Eloitor]

sudo sage example.sage works, but su and then sage example.sage gives the same error.

When reinstalling I get

...
sagemath-10.5_2: removed obsolete entry: ./usr/libexec/sagemath/sage-venv-confi
[*] Configuring unpacked packages
sagemath-10.5_2: configuring ...
Byte-compiling python3.13 code for module sage...
Updating ldconfig(8) cache...
sagemath-10.5_2: installed successfully.

but it still fails to run .sage files

[Eloitor]

this might be related: https://ask.sagemath.org/question/78786/modulenotfounderror-no-module-named-sage/?answer=78829#post-id-78829

I tried sage -python example.sage and it worked

[dkwo]

if you create a new user (as in useradd...), and run sage as that user, does it work?

What is output of xpkg -L?

[Eloitor]

I created a new user called new I placed an example.sage file in its home directory and I get the same error.

PyInstaller
ansifilter
bavarder
binocle
briss
chatblade
dooble
ezcrypt
factor
fancy-cat
fswatch
geopard
hydrus
kanata
latexencode
lesspass-client
libfswatch
lisgd
lyx
pdf.tocgen
play-timer
pmbootstrap
poedit
posting
pyinstaller-hooks-contrib
python3-bounded-pool-executor
python3-click-default-group
python3-datasheet
python3-debugpy
python3-importlib_resources
python3-jiter
python3-openai
python3-pqdm
python3-pymdown-extensions
python3-tiktoken
rockpass
src
typstfmt
wvkbd
yek

[dkwo]

If you remove all those packages that are not in Void's repos, do you still get the error?

[Eloitor]

I removed all of them, and the error persists.

[dkwo]

Does 'xbps-pkgdb -a' show anything relevant?

[Eloitor]

It doesn't report anything

[dkwo]

I'm out of ideas for now, other than speculating this may be simlar to other isses you had before #46261 with sage and or jupyter. Perhaps try a fresh Void install?

[Eloitor]

Thanks for the patience. I'll do a reinstall if I don't find any other solution.