pyproject.toml

[build-system]
requires = ["hatchling", "hatch-vcs"]
build-backend = "hatchling.build"

[tool.hatch.version]
source = "vcs"

[tool.hatch.build.hooks.vcs]
version-file = "AFL/double_agent/_version.py"

[project]
name = "AFL-agent"
dynamic = ["version"]
description = "Agent code for the Autonomous Formulation Lab"
readme = "README.md"
authors = [
    { name = "Tyler B. Martin", email = "tyler.martin@nist.gov" },
    { name = "Peter A. Beaucage" },
    { name = "Duncan R. Sutherland" }
]
license = { file = "LICENSE" }
requires-python = ">=3.11"
classifiers = [
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.11",
]

dependencies = [
    "numpy",
    "xarray",
    "tqdm",
    "netcdf4",
    "pandas",
    "scipy",
    "matplotlib",
    "seaborn",
    "pint",
    "periodictable",
    "pillow",
    "scikit-image",
    "scikit-learn",
    "bottleneck",
    "sasmodels",
    "shapely",
    "sympy",
    "tiled[all]",
    "sasdata",
]

[project.optional-dependencies]
jupyter = [
    "jupyter",
    "jupyterlab",
    "ipywidgets",
    "ipympl",
    "nodejs",
]

tensorflow = [
    "tensorflow>=2.7",
    "gpflow",
]

pytorch = [
    "torch",
    "torchvision",
]

automation = [
    "flask<2.3",  # before_first request is removed in 2.3
    "flask-jwt-extended>=4.0",
    "flask_cors",
    "watchdog",
    "markupsafe",
    "pyserial",
    "bokeh",
    "requests",
]

dev = [
    "black",
    "isort",
    "mypy",
    "pytest",
]

all = [
    "jupyter",
    "jupyterlab", 
    "ipywidgets",
    "ipympl",
    "nodejs",
    "tensorflow>=2.7",
    "gpflow",
    "torch",
    "torchvision",
    "flask<2.3",
    "flask-jwt-extended>=4.0", 
    "flask_cors",
    "watchdog",
    "markupsafe",
    "pyserial",
    "bokeh",
    "requests",
    "black",
    "isort",
    "mypy",
    "pytest",
]

[tool.hatch.build.targets.wheel]
packages = ["AFL"]