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VCF files not compatbile with vcf-format #30

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cdebuck opened this issue Feb 16, 2023 · 0 comments
Open

VCF files not compatbile with vcf-format #30

cdebuck opened this issue Feb 16, 2023 · 0 comments

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@cdebuck
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cdebuck commented Feb 16, 2023

Hi,
I have used nucdiff and I am using the vcf 'yes' option that generates the two vcf files.
But I cannot use these files for follow-up analyses/visualization, because the mandatory INFO column is missing. To solve this, I have added the INFO header and a '.' as value to all lines.
Perhaps this could be incorporated during vcf-file generation? Otherwise this comment might help other users who want to use the vcf-output.

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