From 5cad2f3d67b32efddfdfa626e7666ea1f668efc6 Mon Sep 17 00:00:00 2001
From: Laura Luebbert <56094636+lauraluebbert@users.noreply.github.com>
Date: Mon, 22 Jan 2024 13:25:52 -0800
Subject: [PATCH] Update updates.md

---
 docs/src/en/updates.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/src/en/updates.md b/docs/src/en/updates.md
index f0c89d3d..17008c60 100644
--- a/docs/src/en/updates.md
+++ b/docs/src/en/updates.md
@@ -8,7 +8,7 @@
   - Changed ortho results column name 'motif_in_query' to 'motif_inside_subject_query_overlap'.
   - Added interaction domain information to results (new columns: "InteractionDomainId", "InteractionDomainDescription", "InteractionDomainName").
   - The regex string for regular expression matches was encapsulated as follows: "(?=(regex))" (instead of directly passing the regex string "regex") to enable capturing all occurrences of a motif when the motif length is variable and there are repeats in the sequence ([https://regex101.com/r/HUWLlZ/1](https://regex101.com/r/HUWLlZ/1)).
-- [`gget setup`](./setup.md): Use the `out` argument to specify a directory the ELM database will be downloaded into.
+- [`gget setup`](./setup.md): Use the `out` argument to specify a directory the ELM database will be downloaded into. Completes [this feature request](https://github.com/pachterlab/gget/issues/119).
 - [`gget diamond`](./diamond.md): The DIAMOND command is now run with `--ignore-warnings` flag, allowing niche sequences such as amino acid sequences that only contain nucleotide characters and repeated sequences. This is also true for DIAMOND alignments performed within [`gget elm`](./elm.md).
 - [`gget ref`](./ref.md) and [`gget search`](./search.md) back-end change: the current Ensembl release is fetched from the new [release file](https://ftp.ensembl.org/pub/VERSION) on the Ensembl FTP site to avoid errors during uploads of new releases.
 - [`gget search`](./search.md):