linear_ode.{py,stan,md}: A simple linear ordinary differential equation.1d_gp.{py,stan,md}: A simple 1D Gaussian process.
This folder contains one .py file in the examples/py folder per example.
Corresponding .stan files are located in the examples/stan directory.
In general, figure outputs will be written to the figs directory and
cmdstan output will be written to the out directory.
Examples should be able to be run
- for file systems supporting symlinks (
examples/xstanpyis a symlink toxstanpy) - from within the
examplesdirectory - with a recent enough python version and
- with the required python packages (among others
numpy,pandas,arviz,cached_propertyandmatplotlib) installed.
When run via e.g. python py/linear_ode.py
- fit diagnostics get printed to
stdout, - figures will be generated for each posterior at
examples/figs/{model.name}/{config.name}/{posterior.hash}.png.