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Pull requests: nextflow-io/nextflow

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Pull requests list

Add snake_case to params normalization
#3884 opened Apr 19, 2023 by ahvigil • Review required
1
8
[New Feature] Group tuple size lang/operators
#2489 opened Dec 13, 2021 by Lehmann-Fabian • Review required
2
Test cases for configuration parsing lang/config
#2498 opened Dec 17, 2021 by Lehmann-Fabian • Draft
[New Feature] Evaluate Closure for every input file lang/processes
#2622 opened Feb 3, 2022 by Lehmann-Fabian • Review required
7
Fix process.ext set with withName overrides all processes lang/config
#2783 opened Apr 11, 2022 by jorgeaguileraseqera • Draft
1
5
sort published files so common bioinformatics indexes are processed at the end. lang/processes
#2848 opened May 4, 2022 by lindenb • Review required
2
add support for mpijobs via kubeflow operator executor/k8s
#3392 opened Nov 15, 2022 by xhejtman • Approved
1
32
Micronaut DI support
#3499 opened Dec 15, 2022 by pditommaso • Draft
1
Upgrade kryo to 5.4.0 cache-breaking Changes that will break everyone's task cache
#3562 opened Jan 19, 2023 by bentsherman • Draft
2
10
Add support for checksum algorithm for S3 uploads storage/aws
#3585 opened Jan 30, 2023 by bentsherman • Draft
10
CLI v2
#3600 opened Feb 2, 2023 by bentsherman • Draft
4 of 6 tasks
4
58
Remove unused DSL1 warning
#3671 opened Feb 21, 2023 by bentsherman • Approved
1
@tom-seqera
6
Tests for unstage strategy and fix for special characters
#2181 opened Jun 23, 2021 by Lehmann-Fabian • Review required
Automatic task cleanup
#3849 opened Apr 10, 2023 by bentsherman • Draft
2 of 5 tasks
3
16
Walk file tree on directory publish
#3933 opened May 10, 2023 by bentsherman • Review required
3
14
Prefer to use CacheFunnel implementation when available for caching non-trivial objects
#4077 opened Jul 4, 2023 by robsyme • Review required
1
Remove privileged mode with Fusion storage/fusion
#4141 opened Aug 1, 2023 by bentsherman • Review required
3 of 4 tasks
1
24
Dry run
#4214 opened Aug 24, 2023 by bentsherman • Draft
2
5
More helpful warnings when publish fails to create parent directory error-improvements
#4241 opened Aug 30, 2023 by robsyme • Review required
4
Fix issues with workflow complete handler
#4299 opened Sep 12, 2023 by bentsherman • Review required
1
5
Include FileHolder stage name in task cache cache-breaking Changes that will break everyone's task cache
#4301 opened Sep 13, 2023 by bentsherman • Review required
1
1
Add checksum option to file() for verifying http/ftp files
#4415 opened Oct 16, 2023 by jordeu • Review required
1
1
Support specifying disk image for additional disk with Google Batch executor/google-batch
#4535 opened Nov 22, 2023 by hnawar • Approved
8
Static types for process inputs/outputs
#4553 opened Dec 3, 2023 by bentsherman • Draft
6 of 13 tasks
1
@bentsherman
13
Support prefetching plugins metadata from an http api
#5887 opened Mar 14, 2025 by tom-seqera • Review required
1
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