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Creating genetic maps for hg38? #2

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endrebak opened this issue Dec 12, 2019 · 1 comment
Open

Creating genetic maps for hg38? #2

endrebak opened this issue Dec 12, 2019 · 1 comment

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@endrebak
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Hi and thanks for this script. I'd love to create genetic maps for hg38.

Do you know of any files with recombination rates for hg38 (like ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/working/20130507_omni_recombination_rates/ ?)

Or do you think just lifting over these files is good enough?

Endre

@maximilianh
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Three years later, these files seem to exist now (lifted by someone at the Broad?)
https://alkesgroup.broadinstitute.org/Eagle/downloads/tables/

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