pyproject.toml

[tool.poetry]
name = "singlecell-kaggle"
version = "0.1.0"
description = "Analysis of single-cell multi-omic data"
authors = ["Luke Schiefelbein <luke.schiefelbein@gmail.com>"]

[tool.poetry.dependencies]
python = ">=3.10,<3.11"
numpy = "^1.23.4"
pyarrow = "^10.0.0"
pandas = "^1.5.1"
scipy = "^1.9.3"
sklearn = "^0.0"
tables = "^3.7.0"
ipykernel = "^6.17.0"
kaggle = "^1.5.12"
mlflow = "^2.3.1"
hdf5plugin = "^3.3.1"
packaging = "^21.3"
h5py = "^3.7.0"
bokeh = "2.4.3"
prefect = "^2.6.6"
prefect-dask = "^0.2.1"
seaborn = "^0.12.1"
plotext = "^5.2.8"
jax = {extras = ["cpu"], version = "^0.3.24"}
flax = "^0.6.1"
xgboost = "^1.7.1"

[tool.poetry.dev-dependencies]
ipdb = "^0.13.9"
memray = "^1.4.0"
mypy = "^0.982"
black = "^22.10.0"
pip-tools = "^6.9.0"
pandas-stubs = "^1.5.1"

[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"