From af67dede8acf45ef80e721f9e3c72c0164b1105c Mon Sep 17 00:00:00 2001 From: agrawalm Date: Tue, 17 Nov 2020 01:26:03 -0500 Subject: [PATCH] Update index.md --- docs/index.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/index.md b/docs/index.md index d5ed3cd..b0a1d8b 100644 --- a/docs/index.md +++ b/docs/index.md @@ -12,7 +12,7 @@ However, this data often exists only in clinical text, and not in any structured ## Features ### Pre-Annotations Sometimes concept mentions are simple and straightforward for algorithms to recognize. In these cases, pre-annotations can save annotators time and energy. Pre-annotations outline the suggested span of text alongside its predicted label. The user can then to choose to accept the machine suggestion in just a single click, or modify or delete. In the image below, there are 3 pre-annotations: on flagyl, BUN, and NGT. -
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PRAnCER can flexibly set the pre-annotations to the outputs of any clinical entity extraction system (MetaMap, cTAKES, ClinicalBERT). A user just provides the spans and expected labels in a CSV file; we provide scripts to generate these CSV's from dictionary lookups and from scispaCy. ### Recommendations