From 1205210e065536496a6694c3c4a9e2885e603f5e Mon Sep 17 00:00:00 2001 From: roryk Date: Wed, 4 Dec 2019 20:34:59 -0500 Subject: [PATCH] Remove redundant HISTORY entries. --- HISTORY.md | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/HISTORY.md b/HISTORY.md index ff3fc54dd..f5a9046c2 100644 --- a/HISTORY.md +++ b/HISTORY.md @@ -1,11 +1,8 @@ ## 1.1.9 (in progress) - Fix for get VEP cache. - Support Picard's new syntax for ReorderSam (REFERENCE -> SEQUENCE_DICTIONARY). -- Adds filtering of nucleosome free (NF) regions for ATAC-seq. -- Add peak calling on NF regions. -- Add uploading of full and NF BAM for ATAC-seq. -- Add documentation describing ATAC-seq outputs. - Remove mitochondrial reads from ChIP/ATAC-seq calling. +- Add documentation describing ATAC-seq outputs. - Add ENCODE library complexity metrics for ATAC/ChIP-seq to MultiQC report (see https://www.encodeproject.org/data-standards/terms/#library for a description of the metrics) - Add STAR sample-specific 2-pass. This helps assign a moderate number of reads per genes. Thanks