Update docs

.readthedocs.yml

@@ -0,0 +1,19 @@
+# Read the Docs configuration file
+# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details
+
+version: 2
+
+sphinx:
+  configuration: docs/conf.py
+
+build:
+  image: latest
+
+formats:
+  - epub
+  - pdf
+
+python:
+  version: 3.7
+  install:
+    - requirements: requirements.txt

MANIFEST.in

@@ -1,3 +1,4 @@
 include README.md
 include LICENSE
-include MANIFEST.in
+include MANIFEST.in
+include requirements.txt

deepxde/data/dataset.py

@@ -10,7 +10,7 @@
 
 class DataSet(Data):
     """Fitting Data set.
-    
+
     Args:
         col_x: List of integers.
         col_y: List of integers.

deepxde/data/op_dataset.py

@@ -10,7 +10,7 @@
 
 class OpDataSet(Data):
     """Fitting operator data set.
-    
+
     Args:
         col_x: List of integers.
         col_y: List of integers.

deepxde/maps/opnn.py

@@ -102,7 +102,7 @@ def stacked_dense(self, inputs, units, stack_size, activation=None, use_bias=Tru
 
         Returns:
             tensor: outputs.
-            
+
             If outputs is the NN output, i.e., units = 1,
             2D tensor with shape: `(batch_size, stack_size)`;
             otherwise, 3D tensor with shape: `(batch_size, stack_size, units)`.

docs/conf.py

@@ -46,15 +46,6 @@
     "sphinx.ext.viewcode",
 ]
 
-autodoc_mock_imports = [
-    "matplotlib",
-    "numpy",
-    "salib",
-    "scikit-learn",
-    "scipy",
-    "tensorflow",
-]
-
 # Add any paths that contain templates here, relative to this directory.
 templates_path = ["_templates"]
 
@@ -122,16 +113,12 @@
 
 latex_elements = {
     # The paper size ('letterpaper' or 'a4paper').
-    #
     # 'papersize': 'letterpaper',
     # The font size ('10pt', '11pt' or '12pt').
-    #
     # 'pointsize': '10pt',
     # Additional stuff for the LaTeX preamble.
-    #
     # 'preamble': '',
     # Latex figure (float) alignment
-    #
     # 'figure_align': 'htbp',
 }
 

requirements.txt

@@ -0,0 +1,6 @@
+matplotlib
+numpy
+salib
+scikit-learn
+scipy
+tensorflow

setup.py

@@ -3,9 +3,11 @@
 from setuptools import find_packages
 
 
-with io.open("README.md", "r", encoding="utf-8") as fh:
-    long_description = fh.read()
+with io.open("README.md", "r", encoding="utf-8") as f:
+    long_description = f.read()
 
+with open("requirements.txt", "r") as f:
+    install_requires = [x.strip() for x in f.readlines()]
 
 setup(
     name="DeepXDE",
@@ -18,14 +20,7 @@
     url="https://github.com/lululxvi/deepxde",
     download_url="https://github.com/lululxvi/deepxde/tarball/v0.1.1",
     license="Apache-2.0",
-    install_requires=[
-        "matplotlib",
-        "numpy",
-        "salib",
-        "scikit-learn",
-        "scipy",
-        "tensorflow",
-    ],
+    install_requires=install_requires,
     classifiers=[
         "Development Status :: 3 - Alpha",
         "Intended Audience :: Developers",