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py_cfba

Overview

py_cfba is a Python toolbox designed for constraint-based flux balance analysis of metabolic networks. This tool allows users to simulate metabolic networks by providing a stoichiometric matrix and other necessary parameters.

Features

  • Simulate metabolic networks using a stoichiometric matrix.
  • Analyze imbalanced and balanced metabolites.
  • Test enzyme capacities with known enzyme-reaction mappings and kcat values.

Documentation

For detailed documentation, visit the Read the Docs page.

Contributing

Contributions are welcome! Please fork the repository and submit a pull request with your changes. For major changes, please open an issue first to discuss what you would like to change.