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yam-trait-ontology.obo
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yam-trait-ontology.obo
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format-version: 1.2
auto-generated-by: java
default-namespace: yam_trait_ontology
ontology: TEMP
owl-axioms: Prefix(owl:=<http://www.w3.org/2002/07/owl#>)\nPrefix(rdf:=<http://www.w3.org/1999/02/22-rdf-syntax-ns#>)\nPrefix(xml:=<http://www.w3.org/XML/1998/namespace>)\nPrefix(xsd:=<http://www.w3.org/2001/XMLSchema#>)\nPrefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)\n\n\nOntology(\nDeclaration(AnnotationProperty(<http://www.geneontology.org/formats/oboInOwl#auto-generated-by>))\nDeclaration(AnnotationProperty(<http://www.geneontology.org/formats/oboInOwl#id>))\n\n\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#auto-generated-by> <http://purl.obolibrary.org/obo/CO_343_0003024> \"\"^^xsd:dateTime)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003028> \"CO_343:0000432\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003029> \"CO_343:0010149\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003030> \"CO_343:0000453\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003031> \"CO_343:0010163\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003032> \"CO_343:0000438\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003033> \"CO_343:0000438\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003034> \"CO_343:0000438\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003035> \"CO_343:0000438\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003036> \"CO_343:0000439\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003037> \"CO_343:0000453\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003038> \"CO_343:0010163\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003039> \"CO_343:0000439\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003040> \"CO_343:0000453\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003041> \"CO_343:0010163\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003042> \"CO_343:0002007\"^^xsd:string)\nAnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/TEMP.owl#CO_343:0003043> \"CO_343:0100003\"^^xsd:string)\n)
[Term]
id: CO_343:0000000
name: pollinated florets number
namespace: YamTrait
def: "Quantity of Female Flowers which has been pollinated using male flower from a monoecious or dioecious parent" []
synonym: "NpollF" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000003
name: pollinated spikes number
namespace: YamTrait
def: "Quantity of Female spikes where flowers has been pollinated using male flower from a monoecious or dioecious parent" []
synonym: "NPollSpk" EXACT []
synonym: "NPOLS" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000006
name: fruit developed number
namespace: YamTrait
def: "Quantity of developed fruits per crosses" []
synonym: "FrtN" EXACT []
synonym: "Nfrts" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000009
name: fruits harvested number
namespace: YamTrait
def: "Number of harvested fruits per cross after physiological maturity" []
synonym: "FrtHvstN" EXACT []
synonym: "Matfrt" EXACT []
synonym: "Matured fruit" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000012
name: seed germination rate
namespace: YamTrait
def: "A proportion of sown true (botanical) seed which germinate and produce seedling" []
synonym: "germRate" EXACT []
synonym: "GR" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000015
name: seedling establishment rate
namespace: YamTrait
def: "Establishment rate of seedlings" []
synonym: "sder" EXACT []
synonym: "sderat" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000021
name: yam anthracnose disease severity
namespace: YamTrait
def: "Anthracnose severity caused by the pathogen Colletotricum gloeosporioides. The reaction of plants in a plot to anthracnose infestation (blight or leaf spot) under screenhouse or in the field under natural infestation or artificial inoculation" []
synonym: "AnthracSev" EXACT []
synonym: "YADS" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000024
name: tuber shape
namespace: YamTrait
def: "Tuber predominant shape" []
synonym: "TbrSh" EXACT []
synonym: "TUBSHA" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000027
name: tuber size
namespace: YamTrait
def: "Tuber size" []
synonym: "TbrSz" EXACT []
synonym: "TUBSIZE" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000030
name: canopy architecture
namespace: YamTrait
def: "Organisation or structural arrangements of branchs and leaves distribution giving a specific shape to the above ground part of the plant" []
synonym: "Canarc" EXACT []
synonym: "canopy" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000036
name: tuber dormancy period
namespace: YamTrait
def: "Tuber dormancy period" []
synonym: "Dorm" EXACT []
synonym: "TubDorm" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000042
name: yam tuber dry rot incidence
namespace: YamTrait
def: "Dry rot caused by nematodes (Scutellonema bradys and Practylenchus spp.) in tubers at harvest" []
synonym: "Dryrot" EXACT []
synonym: "S_Bri" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000045
name: yam tuber dry rot severity
namespace: YamTrait
def: "Dry rot caused by nematodes (Scutellonema bradys and Practylenchus spp.) in tubers at harvest" []
synonym: "Dryrot" EXACT []
synonym: "S_Brs" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000048
name: root knot nematode incidence
namespace: YamTrait
def: "Root knot incidence caused by Meloidogyne spp." []
synonym: "R_Kni" EXACT []
synonym: "RKNInc" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000051
name: root knot nematode severity
namespace: YamTrait
def: "Root knot severity caused by Meloidogyne spp." []
synonym: "R_kns" EXACT []
synonym: "RKNSev" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000054
name: tubers planted
namespace: YamTrait
def: "Number of seed tubers planted in a plot or unit area" []
synonym: "NTP" EXACT []
synonym: "seed yam" EXACT []
synonym: "sett-N" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000057
name: weight of planted tubers
namespace: YamTrait
def: "Weight of seed tubers (whole seed yams or setts ) planted in a plot or per unit area. Planting material from a tuber is called sett. Seed tuber could be either small, healthy whole tuber or large tubers cut into pieces (sett)" []
synonym: "Setts planted weight" EXACT []
synonym: "SETW" EXACT []
synonym: "WTP" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000060
name: plant vigor
namespace: YamTrait
def: "The vigour of the vine and leaves of the new plant." []
synonym: "PLNV" EXACT []
synonym: "PVigor" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000063
name: sprout color
namespace: YamTrait
def: "Color of the sprout (vine and leaves)." []
synonym: "SPCOLO" EXACT []
synonym: "SprtCol" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000066
name: proportion of emerged plants
namespace: YamTrait
def: "Proportion of plants /sprouts emerged in a plot" []
synonym: "PPE" EXACT []
synonym: "ratio of emerged plants or sprouts" EXACT []
synonym: "SPROUT" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele, A. Lopez-Mentes
[Term]
id: CO_343:0000069
name: proportion of established plants
namespace: YamTrait
def: "Proportion of plants in a plot well established (plantsgrowing with good vigour and without severe constraints)" []
synonym: "Estbp-ratio" EXACT []
synonym: "Plant establishement ratio" EXACT []
synonym: "STRATE" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000072
name: stems per plant
namespace: YamTrait
def: "Number of stems (vines) with leaves and branches per plant" []
synonym: "Nstem" EXACT []
synonym: "stnp" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000075
name: yam anthracnose disease incidence
namespace: YamTrait
def: "Anthracnose incidence caused by the pathogen Colletotricum gloeosporioides. % of anthracnose ‘blight’ or ''leaf spot''affected plants in a plot" []
synonym: "AnthracInc" EXACT []
synonym: "YADI" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000081
name: virus incidence
namespace: YamTrait
def: "Reaction of the total plants per plot to the virus infection, producing yellow mottle, mosaic and leaves deformation" []
synonym: "VirusInc" EXACT []
synonym: "VRSI" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000084
name: virus severity
namespace: YamTrait
def: "Grade of reaction of the plant to the viruses infection, varying from mottle, mosaics until total leaves deformation" []
synonym: "VirusSev" EXACT []
synonym: "VRSS" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000087
name: secondary sprouting
namespace: YamTrait
def: "Emergence of secondary sprouts on a plant" []
synonym: "SECSP" EXACT []
synonym: "SecSP" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000090
name: time to flower initiation
namespace: YamTrait
def: "Time of the first flower initiation on a plant/s in a plot or any of the plants in a plot shows the first flower" []
synonym: "TIMFlrin" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000093
name: plant sex
namespace: YamTrait
def: "Predominat plant or flower sex" []
synonym: "flower sex" EXACT []
synonym: "flrsex" EXACT []
synonym: "plntsex" EXACT []
synonym: "Sex" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000096
name: flowering intensity
namespace: YamTrait
def: "Abundance or degree of flowering" []
synonym: "FLRI" EXACT []
synonym: "Flrint" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000099
name: fruit set number
namespace: YamTrait
def: "Intensity or proportion of fruit set or development under open or controlled pollination." []
synonym: "FRTINT" EXACT []
synonym: "NFrtSet" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000105
name: presence of bulbil
namespace: YamTrait
def: "Presence of bulbils or aerial tubers in the nodes of the vines" []
synonym: "Aerial tuber formation" EXACT []
synonym: "AeTuber" EXACT []
synonym: "Bulbil" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000108
name: time to bulbil initiation
namespace: YamTrait
def: "Bulbil initiation time" []
synonym: "Aerial tuber initiation time" EXACT []
synonym: "Aetbrin" EXACT []
synonym: "TIMbub" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000111
name: foliage senescence time
namespace: YamTrait
def: "Time to all plants in a plot or unit area show full or complete foliage senescence" []
synonym: "DAYHS" EXACT []
synonym: "Times to complete senescence" EXACT []
synonym: "TIMfsen" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000117
name: number of bulbil
namespace: YamTrait
def: "Number of bulbils or aerial tubers produced" []
synonym: "Aetbrp" EXACT []
synonym: "Bulbp" EXACT []
synonym: "Number of aerial tuber" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000120
name: bulbil yield
namespace: YamTrait
def: "Yield of vine bulbils or aerial tubers harvest" []
synonym: "Aerial tuber yield" EXACT []
synonym: "AetbrwtPl" EXACT []
synonym: "Bulbwtpl" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000123
name: stand harvested number
namespace: YamTrait
def: "Number of plants harvested" []
synonym: "No_std" EXACT []
synonym: "NPH" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000126
name: total tubers per plot
namespace: YamTrait
def: "Number of total (all size) tubers in a net plot or unit area" []
synonym: "TNTP" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000132
name: total tuber yield
namespace: YamTrait
def: "Total tuber yield nonadjusted tons per hectare" []
synonym: "TTYNA" EXACT []
synonym: "TubYld" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000135
name: big size yam yield
namespace: YamTrait
def: "Big size tubers yield nonadjusted tons per hectare" []
synonym: "BTYld" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000138
name: rotten or diseased tubers per plot
namespace: YamTrait
def: "Number of rotten and/or rotten yam tubers in a net plot or unit area" []
synonym: "NRDT" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000141
name: tuber surface texture
namespace: YamTrait
def: "Tuber surface smoothness" []
synonym: "TBRST" EXACT []
synonym: "Tbrtxtur" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000144
name: tuber thorniness
namespace: YamTrait
def: "Exsistence of thorns on the tuber surface" []
synonym: "Tbrspns" EXACT []
synonym: "Thorn" EXACT []
synonym: "Tuber spineness" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000147
name: tuber flesh color
namespace: YamTrait
def: "The surface color of the yam tuber flesh" []
synonym: "Tbrfclr" EXACT []
is_a: CO_343:1000007 ! Quality_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000150
name: tuber flesh oxidation
namespace: YamTrait
def: "Tuber flesh enzymatic oxidation rate" []
synonym: "Oxid" EXACT []
synonym: "Tfoxd" EXACT []
is_a: CO_343:1000007 ! Quality_trait
created_by: A.Amele
[Term]
id: CO_343:0000153
name: leaf beetle damage incidence
namespace: YamTrait
def: "Incidence of leaf beetle damage." []
synonym: "Btl_I" EXACT []
synonym: "Lfbtinc" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000156
name: leaf beetle damage severity
namespace: YamTrait
def: "Severity of leaf beetle damage." []
synonym: "Btl_S" EXACT []
synonym: "Lfbtsev" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000159
name: mealybug tuber infestation incidence
namespace: YamTrait
def: "Incidence of mealybug tuber infestation." []
synonym: "M_Bi" EXACT []
synonym: "MbugInc" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000162
name: mealybug tuber infestation severity
namespace: YamTrait
def: "Severity of mealybug tuber infestation." []
synonym: "M_Bs" EXACT []
synonym: "MbugSev" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000165
name: tuber beetle incidence
namespace: YamTrait
def: "Incidence of tuber beetle damage." []
synonym: "Tbeti" EXACT []
synonym: "Tubtlinc" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000168
name: tuber beetle severity
namespace: YamTrait
def: "Severity of tuber beetle damage." []
synonym: "Tbets" EXACT []
synonym: "Tubtlsev" EXACT []
is_a: CO_343:1000005 ! Biotic_stress_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000174
name: tuber dry matter content
namespace: YamTrait
def: "Proportion of dry matter in the tuber." []
synonym: "TDMC" EXACT []
synonym: "TubDMC" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000180
name: seeds set per fruit
namespace: YamTrait
def: "Number of seeds developed per fruit after hand flowers pollination" []
synonym: "SdSet" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000183
name: tuber hairiness
namespace: YamTrait
def: "Presence of secondary roots on the tuber bark" []
synonym: "RTBS" EXACT []
synonym: "TBR_Hairy" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000188
name: tuber morphological appearance
namespace: YamTrait
def: "Tuber surface look in relation to presence or absence of roots, thorns and sprouted buds on the tuber surface" []
synonym: "Tbrappr" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000191
name: stickiness of pounded yam
namespace: YamTrait
def: "The degree to which the pounded yam is adhesive or stick to the fingure, mouth surface and teeth" []
synonym: "Con_Stick_PY" EXACT []
synonym: "StickPndedYam" EXACT []
is_a: CO_343:1000007 ! Quality_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000194
name: yam taste trait
namespace: YamTrait
def: "Taste of yam when eaten without any additional complementary food" []
synonym: "Con_Taste_PY" EXACT []
synonym: "TastePndedYam" EXACT []
is_a: CO_343:1000007 ! Quality_trait
created_by: A. Lopez-Montes
[Term]
id: CO_343:0000196
name: Tubers planted counting/plot
namespace: YamTrait
def: "The count of the number of tuber planted per plot or unit area" []
synonym: "NTP_cou_tbrplot" EXACT []
synonym: "Sett-N" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000054 ! tubers planted
relationship: variable_of CO_343:0010000 ! tubers (seed yams or setts) planted - counting
relationship: variable_of CO_343:0100000 ! number of tubers
[Term]
id: CO_343:0000197
name: Weight of planted tubers computation/ gm
namespace: YamTrait
def: "Measurement of the weight of N planted tubers (whole seed yams or setts)in gm/sett and record the average (in gm/sett) planted in a plot or per unit area, where the planting material from a tuber is called sett and the seed tuber could be either small, healthy whole tuber or large tubers cut into pieces (sett)" []
synonym: "SETW" EXACT []
synonym: "WTP_Comp_gm" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000057 ! weight of planted tubers
relationship: variable_of CO_343:0010001 ! setts or seed yams planted weight - computation
relationship: variable_of CO_343:0100001 ! gm/sett
[Term]
id: CO_343:0000198
name: first sprout emergence time
namespace: YamTrait
def: "Time to the first sprout (plant) emerge in a plot" []
synonym: "DtFSE" EXACT []
synonym: "TIMFSE" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A.Amele
[Term]
id: CO_343:0000199
name: First sprout emergence time estimation in yy/mm/dd
namespace: YamTrait
def: "The time of first spout (plant) emergence in a plot is recorded as Date(yyyymmdd)." []
synonym: "DATFSE_date_ymd" EXACT []
synonym: "Emerdt" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000198 ! first sprout emergence time
relationship: variable_of CO_343:0010002 ! time first sprout emergence-estimation
relationship: variable_of CO_343:0100002 ! date (yyyymmdd)
[Term]
id: CO_343:0000200
name: 50% sprout emergence time
namespace: YamTrait
def: "Time to 50% sprouts (plants) emerge in a plot" []
synonym: "DtSE" EXACT []
synonym: "TIMSE" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A.Amele
[Term]
id: CO_343:0000201
name: 50% sprout emergence time estimation in yy/mm/dd
namespace: YamTrait
def: "The time to 50% of sprouts emergence is recorded as the Date(yyyymmdd) in which it emerged in a plot." []
synonym: "DATSE_date_ymd" EXACT []
synonym: "DtFemer" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000200 ! 50% sprout emergence time
relationship: variable_of CO_343:0010003 ! time 50% of sprout emergence-estimation
relationship: variable_of CO_343:0100002 ! date (yyyymmdd)
[Term]
id: CO_343:0000202
name: First sprout emergence time computation in days
namespace: YamTrait
def: "The number of days is computed as the time to the first sprout (plant) emergence, which is required from the date of planting to the date in which the first sprout (plant) emerged in a plot" []
synonym: "Emerday" EXACT []
synonym: "TIMFSE_dt_days" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000198 ! first sprout emergence time
relationship: variable_of CO_343:0010004 ! times to first sprout emergence-computation
relationship: variable_of CO_343:0100003 ! days
[Term]
id: CO_343:0000203
name: 50% sprout emergence time computation in days
namespace: YamTrait
def: "The number of days is computed as the time to 50% sprouts (plants) emergence, which is required from date of planting to the date 50% of sprouts (plants) emerged in a plot" []
synonym: "DyFemer" EXACT []
synonym: "TIMSE_dt_days" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000200 ! 50% sprout emergence time
relationship: variable_of CO_343:0010005 ! times to 50% spout emergence-computation
relationship: variable_of CO_343:0100003 ! days
[Term]
id: CO_343:0000204
name: number of emerged plants
namespace: YamTrait
def: "Number of an emerged plants (sprouts) in a plot" []
synonym: "NEP" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000205
name: Emerged plants counting/plot
namespace: YamTrait
def: "The number of emerged plants (sprouts) per plot is counted every week starting from first plant/sprout emergence date till the last plant or spourt emerges in a plot" []
synonym: "NEP_Cou_sprouts" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000204 ! number of emerged plants
relationship: variable_of CO_343:0010006 ! emerged sprouts -counting
relationship: variable_of CO_343:0100004 ! plants per plot
[Term]
id: CO_343:0000206
name: Proportion of emerged plants (sprouts) computation/%
namespace: YamTrait
def: "The proportion or ratio of plants/sprouts emerged in percentage is computed as the number of emerged plants/sprouts divided by the total number of tubers (seed yam or setts) planted in a plot multiplied by 100" []
synonym: "PPE_Comp_pct" EXACT []
synonym: "Ratiosp" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000066 ! proportion of emerged plants
relationship: variable_of CO_343:0010007 ! emerged sprouts or plants proportion-computation
relationship: variable_of CO_343:0100005 ! percentage
[Term]
id: CO_343:0000207
name: established plants
namespace: YamTrait
def: "Number of well established plants ( plants growing with good vigour and without severe constraints) in a plot" []
synonym: "estbp-N" EXACT []
synonym: "NESP" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000208
name: Established plants counting/plot
namespace: YamTrait
def: "The number of well established plants per plot is usually counted at two months after planting" []
synonym: "Estbp-N" EXACT []
synonym: "NESP_cou_plts" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000207 ! established plants
relationship: variable_of CO_343:0010008 ! number of well established plants -counting
relationship: variable_of CO_343:0100004 ! plants per plot
[Term]
id: CO_343:0000209
name: Field establishment rate compuation in %
namespace: YamTrait
def: "The proportion or ratio of well-established plants (growing with good vigour and without severe constraints) in a plot are computed from the total number of tubers (seed yam or setts) planted expressed in percentage" []
synonym: "Estbp-ratio" EXACT []
synonym: "STRATE_Comp_pct" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000069 ! proportion of established plants
relationship: variable_of CO_343:0010009 ! field establishment-computation
relationship: variable_of CO_343:0100006 ! %
[Term]
id: CO_343:0000210
name: Secondary sprouting estimation nominal 0&1
namespace: YamTrait
def: "Visual assessment of the emergence of new secondary sprouts on a plant from the planted seed tuber/sett in a plot at three months after planting using a 0 - 1 scale, where 0=Absent and 1=Present" []
synonym: "SECSP" EXACT []
synonym: "SecSP_E_0to1" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000087 ! secondary sprouting
relationship: variable_of CO_343:0010010 ! secondary sprouting - estimation
relationship: variable_of CO_343:0100007 ! 0-1 scale
[Term]
id: CO_343:0000211
name: Sprout color estimation 1-5
namespace: YamTrait
def: "Visual assessment of the predominant color of the sprouts (vine and leaves) per plot at 20 days after emergence using a 1-5 scale, where 1=Green, 2=Purplish green, 3=Brownish green, 4=Dark brown and 5=Purple" []
synonym: "SPCOLO" EXACT []
synonym: "SprtCol_E_1to5" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000063 ! sprout color
relationship: variable_of CO_343:0010011 ! sprout color - estimation
relationship: variable_of CO_343:0100008 ! 1-5 scale
[Term]
id: CO_343:0000212
name: sprout length
namespace: YamTrait
def: "Length of sprouted shoots (vines)" []
synonym: "Spleng" EXACT []
synonym: "SPRTL" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000213
name: Sprout length measurement in cm
namespace: YamTrait
def: "The average length of sprouted shoots (vines) in cm of five representative plants measurement taken in a plot is computed" []
synonym: "SPleng_M_cm" EXACT []
synonym: "SPRTL" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000212 ! sprout length
relationship: variable_of CO_343:0010012 ! sprout length-computation
relationship: variable_of CO_343:0100009 ! cm
[Term]
id: CO_343:0000214
name: presence of spot on spine base
namespace: YamTrait
def: "Presence of colored spots at the spine base of sprouted shoots (vine) with spines" []
synonym: "SPBCOL" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000215
name: Spine base color estimation nominal 0&1
namespace: YamTrait
def: "Visual assessment of the presence (existence) of colored spot at base of spines on a sprout (vine) using a 0-1 scale, where 0=Absent and 1=Present" []
synonym: "SPBCOL_E_0to1" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000214 ! presence of spot on spine base
relationship: variable_of CO_343:0010013 ! colored spots on spine base-estimation
relationship: variable_of CO_343:0100007 ! 0-1 scale
[Term]
id: CO_343:0000216
name: spines on sprout presence
namespace: YamTrait
def: "Presence of spines on sprout (vines)" []
synonym: "SPNSP" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000217
name: Spines on sprout presence estimation nominal 0&1
namespace: YamTrait
def: "Visual assessment of the absence or presence of spines on a sprout (vine) using a 0-1 scale, where 0=Absent and 1=Present" []
synonym: "SPNSP_E_0to1" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000216 ! spines on sprout presence
relationship: variable_of CO_343:0010014 ! spines on sprout base-estimation
relationship: variable_of CO_343:0100007 ! 0-1 scale
[Term]
id: CO_343:0000218
name: sprout hairiness
namespace: YamTrait
def: "Hairs on sprout (vines)" []
synonym: "HAIRSP" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000219
name: Sprout hairiness estimation nominal 0&2
namespace: YamTrait
def: "Visual assessment of the existence of hairs on a sprout (vine) using a 0-2 scale, where 0=Absent, 1=Sparse and 2=Dense" []
synonym: "HAIRSP_E_0to2" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000218 ! sprout hairiness
relationship: variable_of CO_343:0010015 ! hairiness of sprout - estimation
relationship: variable_of CO_343:0100010 ! 0-2 scale
[Term]
id: CO_343:0000220
name: time to first leaf emergence
namespace: YamTrait
def: "Time to the first leaf emergence on a plant or sprouted shoot (vine) in a plot" []
synonym: "TIMLE" EXACT []
is_a: CO_343:1000006 ! Phenological_trait
created_by: A.Amele
[Term]
id: CO_343:0000221
name: First leaf emergence time estimation in yy/mm/dd
namespace: YamTrait
def: "Visual observation of the time of first leaf emergence on sprouted shoot (vine) using the date(yyyymmdd) it emerges" []
synonym: "DateLE_date_ymd" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000220 ! time to first leaf emergence
relationship: variable_of CO_343:0010016 ! time of first leaf emergence on sprouted shoot (vines)-estimation
relationship: variable_of CO_343:0100002 ! date (yyyymmdd)
[Term]
id: CO_343:0000222
name: Time to first leaf emergence computation
namespace: YamTrait
def: "Computation of the time to the first leaf emergence using the number of days from first sprout emergence to the first leaf that emerges on a sprouted shoot (vine) in a plot" []
synonym: "TIMLE_dt_day" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000220 ! time to first leaf emergence
relationship: variable_of CO_343:0010017 ! times to the first leaf emergence on sprouted shoot (vines)-computation
relationship: variable_of CO_343:0100003 ! days
[Term]
id: CO_343:0000223
name: leaf apex shape
namespace: YamTrait
def: "Leaf apex shape" []
synonym: "Lfapx" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000224
name: Leaf apex shape estimation 1-3
namespace: YamTrait
def: "Visual assessment of the leaf apex shape of mature plants in a plot using a 1-3 general scale, where 1=obtuse, 2= acute and 3=emarginate" []
synonym: "Lfapx_E_1to3" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000223 ! leaf apex shape
relationship: variable_of CO_343:0010018 ! leaf apex shape-estimation
relationship: variable_of CO_343:0100011 ! 1-3 general scale
[Term]
id: CO_343:0000225
name: leaf shape
namespace: YamTrait
def: "Leaf shape of plants" []
synonym: "Lfshp" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000226
name: Leaf shape estimation 1-7
namespace: YamTrait
def: "Visual assessment of leaf shape of mature plants in a plot using a 1-7 genearal scale, where 1= Ovate, 3= Cordate, 5= Sagittate and 7 = Hastate" []
synonym: "Lfshp_E_1to7" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000225 ! leaf shape
relationship: variable_of CO_343:0010019 ! leaf shape-estimation
relationship: variable_of CO_343:0100012 ! 1-7 general scale
[Term]
id: CO_343:0000227
name: Stems per plant computation per plant
namespace: YamTrait
def: "Computation of average of the number of stems (vines) with leaves and branches per established plants in a plot" []
synonym: "Nstem_cou_stmplnt" EXACT []
synonym: "stnp" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000072 ! stems per plant
relationship: variable_of CO_343:0010020 ! number of stems per plant-computation
relationship: variable_of CO_343:0100013 ! number of stem
[Term]
id: CO_343:0000228
name: stem diameter
namespace: YamTrait
def: "Stem diameter of a mature plant (5 to 6 month old plant)" []
synonym: "stemdim" EXACT []
synonym: "STMDM" EXACT []
is_a: CO_343:1000008 ! Agronomical_trait
created_by: A.Amele
[Term]
id: CO_343:0000229
name: Stem diameter computation in mm
namespace: YamTrait
def: "Measurement of the stem diameter in mm of a mature plant (5 to 6 month old plant) at 15 cm above the base of five plants before senescence in a plot and the computation of the average" []
synonym: "stemdim" EXACT []
synonym: "STMDM_M_mm" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000228 ! stem diameter
relationship: variable_of CO_343:0010021 ! stem diameter-computation
relationship: variable_of CO_343:0100014 ! mm
[Term]
id: CO_343:0000230
name: internode length
namespace: YamTrait
def: "Stem internode length of a mature plant (5 to 6 month old plant)" []
synonym: "INODL" EXACT []
synonym: "Inodlgth" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000231
name: Internode length computation in cm
namespace: YamTrait
def: "Measurement of the stem internode length of five matured plants (5 to 6 month old plant) before senescence at 1 meter height and computation of the average" []
synonym: "INODL" EXACT []
synonym: "InodLgth_M_cm" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000230 ! internode length
relationship: variable_of CO_343:0010022 ! internode length -computation
relationship: variable_of CO_343:0100009 ! cm
[Term]
id: CO_343:0000232
name: number of internodes to first branching
namespace: YamTrait
def: "Number of internodes to first branchs on a plant" []
synonym: "NINFB" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000233
name: Number of internodes to first branching computation/plot
namespace: YamTrait
def: "Computation of average number of internodes to first branching of a plant on at least five plants internode counts taken in a plot" []
synonym: "NINFB_E_intrnod" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000232 ! number of internodes to first branching
relationship: variable_of CO_343:0010023 ! number of internode-computation
relationship: variable_of CO_343:0100015 ! number of internode
[Term]
id: CO_343:0000234
name: spines on stem density
namespace: YamTrait
def: "Intensity of spines on stem (vine) above base of mature plant (5 to 6 month old plant)" []
synonym: "SPNAB" EXACT []
is_a: CO_343:1000010 ! Morphological_trait
created_by: A.Amele
[Term]
id: CO_343:0000235
name: Spines on stem estimation 0-2
namespace: YamTrait
def: "Visual assessment of the intensity of spines on a stem (vine) above the base of mature plants (5 to 6 month old plant) in a plot using 0-2 scale, where 0 = Absent, 1 = Few and 2 = Many" []
synonym: "SPNAB_E_0to2" EXACT []
is_a: CO_343:1000003 ! Variable
relationship: variable_of CO_343:0000234 ! spines on stem density
relationship: variable_of CO_343:0010024 ! density of spines on stem base of a plant-etimation