454-and-IonTorrent

GeneLab bioinformatics processing protocol for 454 and IonTorrent amplicon sequencing data

The document GL-DPPD-7106.md holds an overview and example commands of how GeneLab processes 454 and IonTorrent amplicon datasets. Exact processing commands for specific datasets that have been released is available in the GLDS_Processing_Scripts sub-directory and is also provided with their processed data in the GeneLab Data Systems (GLDS) repository.

Developed and maintained by:
Michael D. Lee ([email protected])

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Repository links

• Current processing protocol (GL-DPPD-7106.md)
• Processed dataset files
• Template worflow files
• Workflow information and usage instructions