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Updated git and GitHub (markdown)
Added presentation
Added where to get diffmerge
Replace 'say' with 'type' to avoid any potential confusion.
add diffmerge to index
Added directions for diffmerge package for difftool/mergetool
Update swcarpentry links
Add new shared machine section link to Contents list at top of page.
Added instructions for how to limit the number of threads git spawns.
Update and simplify the working with remotes section
Add missing "git fetch ESCOMP" line to the section on updating your branch to latest cam_development
Added link to setting up GitHub authentication token
Modify instructions for merging a branch up to cam_development
Minor edits in Updating your branch directions
Add updating your branch
Add setting push.default to nothing
Expanded tips on working with remotes
Added configuration and use information for difftool
Fix internal link?
Added some basic instructions for using diff
Added some advanced git resources
Replaced "NCAR" with "ESCOMP".
Replaced references to 'CAMdev' with just 'CAM'
Bold output
Added Table of Contents
Use percent prompt for typed comands (need typography section) and added more info about clones.